RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TMEM114B3SHH9 223 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 STK25O00506 426 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 PHGDHO43175 533 aaKnown RBP16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 POP4O95707 220 aaKnown RBP16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 AHSGP02765 367 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 SBK3P0C264 359 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 ACADSP16219 412 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 ACTR3P61158 418 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 AP1S1P61966 158 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 BLMHQ13867 455 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 CCINQ13939 588 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 UBXN2BQ14CS0 331 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 TRMT5Q32P41 509 aaKnown RBP16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 SLC9B1Q4ZJI4 515 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 ANO7Q6IWH7 933 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 RANBP10Q6VN20 620 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 ZNF852Q6ZMS4 543 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 MAPK15Q8TD08 544 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 SCG3Q8WXD2 468 aaKnown RBP16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 RHOJQ9H4E5 214 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 ATP13A3Q9H7F0 1226 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 PRSS16Q9NQE7 514 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 OXSMQ9NWU1 459 aa16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 MUC22E2RYF6 1773 aaPredicted RBP16.88■□□□□ 0.29
CDKN1A-201ENST00000244741 EDDM13A0A1B0GTR0 161 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 PLK4O00444 970 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 ADAM23O75077 832 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 ATXN1LP0C7T5 689 aaKnown RBP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 GLULP15104 373 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 CTPS1P17812 591 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 HADHAP40939 763 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 COPAP53621 1224 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 USP10Q14694 798 aaKnown RBP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 RALGPS1Q5JS13 557 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 ESRP1Q6NXG1 681 aaKnown RBP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 MYLK4Q86YV6 388 aaPredicted RBP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 FLCNQ8NFG4 579 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 AGR3Q8TD06 166 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 KLHL32Q96NJ5 620 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 HEPHQ9BQS7 1158 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 SLC6A17Q9H1V8 727 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 IL36AQ9UHA7 158 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 TLK1Q9UKI8 766 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 CXorf51AA0A1B0GTR3 108 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 TK2O00142 265 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 VAPBO95292 243 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 SLC4A1P02730 911 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 HNRNPLP14866 589 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 C1orf146Q5VVC0 180 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 MMAAQ8IVH4 418 aaKnown RBP16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 SLC41A1Q8IVJ1 513 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 TRIB3Q96RU7 358 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 NSMCE4AQ9NXX6 385 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 SLC2A6Q9UGQ3 507 aa16.87■□□□□ 0.29
CDKN1A-201ENST00000244741 LOC285095A0A1B0GVY8 99 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 GOLGA8CPA6NN73 597 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 KPNA3O00505 521 aaPredicted RBP16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 ZBTB14O43829 449 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 CHRNGP07510 517 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 ALPIP09923 528 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 SLC35E2BP0CK96 405 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 CES1P23141 567 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 ARNTP27540 789 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 SERPINA4P29622 427 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 CCR10P46092 362 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 ARCN1P48444 511 aaKnown RBP16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 CSNK1DP48730 415 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 MPP1Q00013 466 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 CTBP1Q13363 440 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 CFAP157Q5JU67 520 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 C6orf163Q5TEZ5 329 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 KCTD4Q8WVF5 259 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 FAM129BQ96TA1 746 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 SUV39H2Q9H5I1 410 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 RUVBL2Q9Y230 463 aaKnown RBP16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 ANKRD6Q9Y2G4 727 aa16.86■□□□□ 0.29
CDKN1A-201ENST00000244741 LOC100653049A0A140TA62 436 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 E9PBE3 544 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 DCXO43602 365 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 BUD23O43709 281 aaKnown RBP16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 KLHL41O60662 606 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 KRT34O76011 436 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 COL9A1P20849 921 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 NTSR1P30989 418 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 GLRBP48167 497 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 EPHB1P54762 984 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 RAD51Q06609 339 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 ARMC12Q5T9G4 340 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 GDPD4Q6W3E5 623 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 ZYG11AQ6WRX3 759 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 BLOC1S5Q8TDH9 187 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 SREK1Q8WXA9 508 aaKnown RBP16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 FEM1CQ96JP0 617 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 OR52B2Q96RD2 323 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 WNT16Q9UBV4 365 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 MAN2B1O00754 1011 aa16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 LIN7AO14910 233 aaPredicted RBP16.85■□□□□ 0.29
CDKN1A-201ENST00000244741 SYNCRIPO60506 623 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms