RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 BEST1O76090 585 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CYP2B6P20813 491 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PCSK1P29120 753 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TYK2P29597 1187 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PRDX6P30041 224 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 POLD2P49005 469 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CXCR3P49682 368 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 LGALS4P56470 323 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PITX1P78337 314 aaPredicted RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 MRPS35P82673 323 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 COG7P83436 770 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 NME3Q13232 169 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SMAD4Q13485 552 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TUBB3Q13509 450 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 KPNB1Q14974 876 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 MUM1Q2TAK8 710 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ANKRD20A4Q4UJ75 823 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 MDH1BQ5I0G3 518 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SYPL2Q5VXT5 272 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 METTL21CQ5VZV1 264 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TWF2Q6IBS0 349 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RFWD3Q6PCD5 774 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ATG14Q6ZNE5 492 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 LINC00523Q86TU6 105 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 STK32CQ86UX6 486 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CCDC117Q8IWD4 279 aaPredicted RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RBM15BQ8NDT2 890 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 OR5AN1Q8NGI8 311 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RDH11Q8TC12 318 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 GAB3Q8WWW8 586 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SMARCD1Q96GM5 515 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ZNF333Q96JL9 665 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RILPQ96NA2 401 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TSGA13Q96PP4 275 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 C20orf27Q9GZN8 174 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 IL22Q9GZX6 179 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 GOLGA2P5Q9HBQ8 144 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CSNK1G1Q9HCP0 422 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 POLR3BQ9NW08 1133 aaPredicted RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ARMCX1Q9P291 453 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ANGPTL2Q9UKU9 493 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CORO1CQ9ULV4 474 aaPredicted RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 WASF3Q9UPY6 502 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 DNAJC16Q9Y2G8 782 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CDY2AQ9Y6F7 541 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CDY1Q9Y6F8 540 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ZCWPW2A0A1B0GU75 182 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 M0QZ92 97 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CLDN5O00501 218 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 NRP1O14786 923 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 FKBP6O75344 327 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ABLIM3O94929 683 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 IL18BPO95998 194 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 KNG1P01042 644 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PRKCGP05129 697 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ENO1P06733 434 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RALBP11234 206 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CPA3P15088 417 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 AGXTP21549 392 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 MTNR1BP49286 362 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 NDUFV1P49821 464 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 MAP3K7CLP57077 242 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ACTR3P61158 418 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ABCE1P61221 599 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RPL10AP62906 217 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CRADDP78560 199 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 HTRA3P83110 453 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SRSF2Q01130 221 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CD83Q01151 205 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PRPSAP1Q14558 356 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 RCN1Q15293 331 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PCBP2Q15366 365 aaKnown RBP eCLIP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PM20D1Q6GTS8 502 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 NAPEPLDQ6IQ20 393 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CXorf57Q6NSI4 855 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 AAGABQ6PD74 315 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 DCLRE1AQ6PJP8 1040 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 ADGRG6Q86SQ4 1221 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CLEC14AQ86T13 490 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 FAM129CQ86XR2 697 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CPA6Q8N4T0 437 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 DCLK2Q8N568 766 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PPFIBP2Q8ND30 876 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 NDRG1Q92597 394 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SMOQ99835 787 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 COLEC11Q9BWP8 271 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 KCNK12Q9HB15 430 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SNX15Q9NRS6 342 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 SEPT10Q9P0V9 454 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PRSS50Q9UI38 385 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 EDARQ9UNE0 448 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 LRCH1Q9Y2L9 728 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 VWA7Q9Y334 891 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 KCTD3Q9Y597 815 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 PSAT1Q9Y617 370 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 YJEFN3A6XGL0 299 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 PRR5-ARHGAP8B1AHC4 643 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 HHLA1C9JL84 531 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 KCNK1O00180 336 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms