RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TAF8Q7Z7C8 310 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 SH3KBP1Q96B97 665 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 ECHDC3Q96DC8 303 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PRRX2Q99811 253 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 SYNDIG1Q9H7V2 258 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 ANGPTL3Q9Y5C1 460 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PLRG1O43660 514 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ZNF821O75541 412 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 THEGLP0DJG4 465 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 MYBL2P10244 700 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ABCG1P45844 678 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 METAP1P53582 386 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 CHST15Q7LFX5 561 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 SRRM1Q8IYB3 904 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 PHACTR4Q8IZ21 702 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 LENG8Q96PV6 779 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 NUSAP1Q9BXS6 441 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ACSS3Q9H6R3 686 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 WSB2Q9NYS7 404 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 GGT7Q9UJ14 662 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 GREB1Q4ZG55 1949 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM95CA0A1B0GW59 222 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ABHD2P08910 425 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 PKMP14618 531 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 CNR2P34972 360 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 GNPDA1P46926 289 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 COPAP53621 1224 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 PTPRRQ15256 657 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 GPRC6AQ5T6X5 926 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 BEND7Q8N7W2 519 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 AENQ8WTP8 325 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 HNRNPLLQ8WVV9 542 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 MTBPQ96DY7 904 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 WDR92Q96MX6 357 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 TRIB3Q96RU7 358 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 EVA1BQ9NVM1 165 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 MID2Q9UJV3 735 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 TMEM98Q9Y2Y6 226 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ANAPC1Q9H1A4 1944 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 FZD6O60353 706 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 TAC1P20366 129 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 SERPINB8P50452 374 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ITIH4Q14624 930 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ANGPT1Q15389 498 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 PLA2G4EQ3MJ16 856 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM45BPQ6NSW5 357 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ANKRD42Q8N9B4 389 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 GPR26Q8NDV2 337 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM45AQ8TCE6 357 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ZSCAN32Q9NX65 697 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 VPS18Q9P253 973 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 RIMKLBQ9ULI2 386 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 SCAMP1O15126 338 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 PIAS1O75925 651 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 IDSP22304 550 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 KCNA4P22459 653 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 CD38P28907 300 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 CLDN2P57739 230 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 PTSQ03393 145 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 TRIM74Q86UV6 250 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 DENND6AQ8IWF6 608 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 NXPE1Q8N323 547 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 EZH1Q92800 747 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 CABS1Q96KC9 395 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 ZNF778Q96MU6 729 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 MCCC1Q96RQ3 725 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 EPHX3Q9H6B9 360 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 IL26Q9NPH9 171 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 INTS10Q9NVR2 710 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 OR1A2Q9Y585 309 aa11.04□□□□□ -0.64
TNFAIP3-201ENST00000237289 TTC28Q96AY4 2481 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 LDB2O43679 373 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 CRCPO75575 148 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 CD27P26842 260 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 SKIV2L2P42285 1042 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 BMPR2Q13873 1038 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM83EQ2M2I3 478 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 DENND5AQ6IQ26 1287 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 LRRTM4Q86VH4 590 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 SEC14L1Q92503 715 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 NDNQ99608 321 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 SERGEFQ9UGK8 458 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 FBXO4Q9UKT5 387 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 ACOT9Q9Y305 439 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 SHROOM3Q8TF72 1996 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 C2orf16Q68DN1 1984 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 GOLGA8RI6L899 631 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 ESR1P03372 595 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 C1SP09871 688 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 DGKAP23743 735 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 CCR5P51681 352 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 IRX4P78413 519 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 MPP1Q00013 466 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 TMEM115Q12893 351 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 IRF4Q15306 451 aa11.03□□□□□ -0.64
TNFAIP3-201ENST00000237289 ATP13A5Q4VNC0 1218 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms