RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TPSAB1Q15661 275 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 BTBD16Q32M84 506 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ZBTB41Q5SVQ8 909 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 LAMTOR1Q6IAA8 161 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 DENND5AQ6IQ26 1287 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 OTOP1Q7RTM1 612 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 RETREG3Q86VR2 466 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 KIAA0319LQ8IZA0 1049 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TAGAPQ8N103 731 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 CYP2W1Q8TAV3 490 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 MBOAT4Q96T53 435 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 CCDC32Q9BV29 185 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ZBTB20Q9HC78 741 aaPredicted RBP12.95□□□□□ -0.34
MSH2-201ENST00000233146 EVA1BQ9NVM1 165 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ADAM28Q9UKQ2 775 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 LOC110117498-PIK3R3F6TDL0 507 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 YKT6O15498 198 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 LRIG2O94898 1065 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 MT-ND1P03886 318 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 C2P06681 752 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 STMN1P16949 149 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 MSH3P20585 1137 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 DGCR6Q14129 220 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 KIF18BQ86Y91 864 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TMEM151AQ8N4L1 468 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 PQLC3Q8N755 202 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TTLL6Q8N841 843 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ZBTB44Q8NCP5 570 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 BLOC1S5Q8TDH9 187 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ELMO1Q92556 727 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 PRRG3Q9BZD7 231 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 C14orf119Q9NWQ9 140 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 CCDC59Q9P031 241 aaKnown RBP12.95□□□□□ -0.34
MSH2-201ENST00000233146 ERVK-18Q9QC07 812 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ADGRE2Q9UHX3 823 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 STAP1Q9ULZ2 295 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
MSH2-201ENST00000233146 A0A096LPK6 155 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 EEF2KO00418 725 aaKnown RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 DSCR3O14972 297 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 ANGPT2O15123 496 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 UBDO15205 165 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PLA2G6O60733 806 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 HPRP00739 348 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MTHFD1P11586 935 aaKnown RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 CD9P21926 228 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PSMA2P25787 234 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PSMB9P28065 219 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SNRPD2P62316 118 aaKnown RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 GTF2BQ00403 316 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 TIGD3Q6B0B8 471 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PRMT9Q6P2P2 845 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MICU2Q8IYU8 434 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PLD5Q8N7P1 536 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MCOLN3Q8TDD5 553 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 BPIFB1Q8TDL5 484 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 RPL10LQ96L21 214 aaKnown RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 RPRD1AQ96P16 312 aaPredicted RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 ACE2Q9BYF1 805 aaPredicted RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 TMEM39AQ9NV64 488 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MAP10Q9P2G4 905 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SLC23A1Q9UHI7 598 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 HSPE1-MOB4S4R3N1 261 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 A0A0U1RQS6 177 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PNMA8CA0A1B0GUJ8 204 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 ADAM11O75078 769 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PRSS23O95084 383 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MPOP05164 745 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MYL3P08590 195 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SBK3P0C264 359 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SREBF1P36956 1147 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PIGAP37287 484 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 HNF4AP41235 474 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 MASP1P48740 699 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 TMEM81Q6P7N7 255 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 CLEC4FQ8N1N0 589 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 MINDY1Q8N5J2 469 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 ST13P5Q8NFI4 369 aaPredicted RBP12.94□□□□□ -0.34
MSH2-201ENST00000233146 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SLC22A8Q8TCC7 542 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 TBCBQ99426 244 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 SLC6A17Q9H1V8 727 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 RAPGEFL1Q9UHV5 662 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 TLR6Q9Y2C9 796 aa12.94□□□□□ -0.34
MSH2-201ENST00000233146 CABYRO75952 493 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 SLC22A5O76082 557 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 C1QBP02746 253 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 HMGN1P05114 100 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms