RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SLC41A1Q8IVJ1 513 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 TRIM42Q8IWZ5 723 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 ZNF366Q8N895 744 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 TERB1Q8NA31 727 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 CHST14Q8NCH0 376 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 MDGA1Q8NFP4 955 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 PIH1D2Q8WWB5 315 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 ATXN2LQ8WWM7 1075 aaKnown RBP9.72□□□□□ -0.85
TTC1-201ENST00000231238 OR8D1Q8WZ84 308 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 SUSD6Q92537 303 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 CDKN2AIPNLQ96HQ2 116 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 SCYL1Q96KG9 808 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 MAGEB18Q96M61 343 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 NSMCE3Q96MG7 304 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 GPR22Q99680 433 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 OSBPL1AQ9BXW6 950 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 CAB39LQ9H9S4 337 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 HPS4Q9NQG7 708 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 DYRK4Q9NR20 520 aa9.72□□□□□ -0.85
TTC1-201ENST00000231238 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.72□□□□□ -0.85
TTC1-201ENST00000231238 LAMA2P24043 3122 aaKnown RBP9.71□□□□□ -0.85
TTC1-201ENST00000231238 C2orf16Q68DN1 1984 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 EDDM13A0A1B0GTR0 161 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 A0A1W2PPC1 479 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 ERICH4A6NGS2 130 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 SRRM3A6NNA2 597 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 H3BQ06 376 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 KPNA3O00505 521 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 TRAFD1O14545 582 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 NDUFB5O43674 189 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 LEFTY1O75610 366 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 HAUS5O94927 633 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 ALDOAP04075 364 aaKnown RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 PRNPP04156 253 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 ITGALP20701 1170 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 OGNP20774 298 aaKnown RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 CRHR1P34998 444 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 GJA4P35212 333 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 HNF1BP35680 557 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 NEK3P51956 506 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 POU4F1Q01851 419 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 RNF187Q5TA31 235 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 ERAP2Q6P179 960 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 CNSTQ6PJW8 725 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 KYAT3Q6YP21 454 aaKnown RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 DSG4Q86SJ6 1040 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 LDB1Q86U70 411 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 OR2A12Q8NGT7 310 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 CKAP2Q8WWK9 683 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 FGF14Q92915 247 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 NXPE3Q969Y0 559 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 SMIM14Q96QK8 99 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 PLA2G2FQ9BZM2 168 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 MKS1Q9NXB0 559 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 SLC17A7Q9P2U7 560 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 MID2Q9UJV3 735 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 ANKRD6Q9Y2G4 727 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 CRYL1Q9Y2S2 319 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 ACOT9Q9Y305 439 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 USP15Q9Y4E8 981 aaPredicted RBP9.71□□□□□ -0.86
TTC1-201ENST00000231238 NUMBLQ9Y6R0 609 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 CHD7Q9P2D1 2997 aa9.71□□□□□ -0.86
TTC1-201ENST00000231238 ATG2AQ2TAZ0 1938 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 MYOFQ9NZM1 2061 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 HMX2A2RU54 273 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 WASH3PC4AMC7 463 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 PHGDHO43175 533 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 ZNF821O75541 412 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 SRP72O76094 671 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 KAT7O95251 611 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 CLDN7O95471 211 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 ASMTLO95671 621 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 FAM107AO95990 144 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 C2P06681 752 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 GSTA1P08263 222 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 GRIA2P42262 883 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 LEPRP48357 1165 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 TTPAP49638 278 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 RAB10P61026 200 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 ACVR1Q04771 509 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 CACNG1Q06432 222 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 MSLNQ13421 630 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 PDE1CQ14123 709 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 POM121L1PQ3SYA9 428 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 PPM1JQ5JR12 505 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 N4BP2L1Q5TBK1 243 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 FAM45BPQ6NSW5 357 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 KLC3Q6P597 504 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 FAM151BQ6UXP7 276 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 TPRG1Q6ZUI0 275 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 TTC7BQ86TV6 843 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 NUDCD3Q8IVD9 361 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 TTC30BQ8N4P2 665 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 TMEM102Q8N9M5 508 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 SMRP1Q8NCR6 262 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 GPR150Q8NGU9 434 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 FAM45AQ8TCE6 357 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 SCRN2Q96FV2 425 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms