RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GULP1Q9UBP9 304 aa13.6□□□□□ -0.23
VEGFA-201ENST00000230480 SNX12Q9UMY4 172 aa13.6□□□□□ -0.23
VEGFA-201ENST00000230480 ZNF148Q9UQR1 794 aa13.6□□□□□ -0.23
VEGFA-201ENST00000230480 ANKRD11Q6UB99 2663 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-201ENST00000230480 GOLGA6CA6NDK9 693 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 NEMP2A6NFY4 417 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 MROH6A6NGR9 719 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 H3BM21 787 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 PDE2AO00408 941 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-201ENST00000230480 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 ZSCAN12O43309 604 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 NUAK1O60285 661 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 PTMAP06454 111 aaKnown RBP13.59□□□□□ -0.23
VEGFA-201ENST00000230480 GOLGA6DP0CG33 693 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 KELP23276 732 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 GNPDA1P46926 289 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 CDKN1CP49918 316 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-201ENST00000230480 BLKP51451 505 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 ARSDP51689 593 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 B4GALNT1Q00973 533 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 LONRF2Q1L5Z9 754 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 CERCAMQ5T4B2 595 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 PAPD7Q5XG87 772 aaKnown RBP13.59□□□□□ -0.23
VEGFA-201ENST00000230480 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 MARK2Q7KZI7 788 aaKnown RBP13.59□□□□□ -0.23
VEGFA-201ENST00000230480 NAGSQ8N159 534 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 OR4K2Q8NGD2 314 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 OR52K1Q8NGK4 314 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 PBKQ96KB5 322 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 ZNF778Q96MU6 729 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 VPS35Q96QK1 796 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 SPATA16Q9BXB7 569 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 CASS4Q9NQ75 786 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 GOLGA6AQ9NYA3 693 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 HACD3Q9P035 362 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 VPS18Q9P253 973 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 FKBPLQ9UIM3 349 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 APOBEC2Q9Y235 224 aaKnown RBP13.59□□□□□ -0.23
VEGFA-201ENST00000230480 MSRB2Q9Y3D2 182 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 WDFY3Q8IZQ1 3526 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
VEGFA-201ENST00000230480 A0A1W2PQM1 296 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 C1QTNF9BB2RNN3 333 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 RFPL3O75679 317 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 IFNB1P01574 187 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 ANXA6P08133 673 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 C1QTNF9P0C862 333 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-201ENST00000230480 PDX1P52945 283 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 CTSCP53634 463 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 HLTFQ14527 1009 aaKnown RBP eCLIP13.58□□□□□ -0.24
VEGFA-201ENST00000230480 ELOCQ15369 112 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC70Q6NSX1 233 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 GLT6D1Q7Z4J2 308 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 CREG2Q8IUH2 290 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 SDR16C5Q8N3Y7 309 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
VEGFA-201ENST00000230480 ZSCAN5AQ9BUG6 496 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 DUSP23Q9BVJ7 150 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 FSD1LQ9BXM9 530 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 CDH19Q9H159 772 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 OR2AG1Q9H205 316 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 SUDS3Q9H7L9 328 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-201ENST00000230480 TRIM39Q9HCM9 518 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 TAAR2Q9P1P5 351 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 SIRPGQ9P1W8 387 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 PADI4Q9UM07 663 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 GPR34Q9UPC5 381 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 NEUROG3Q9Y4Z2 214 aa13.58□□□□□ -0.24
VEGFA-201ENST00000230480 FREM2Q5SZK8 3169 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 TRBV5-4A0A0C4DH59 114 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 TAF4O00268 1085 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 B4GAT1O43505 415 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 NRDCO43847 1150 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 OPA1O60313 960 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 STK10O94804 968 aaKnown RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 TRIM16O95361 564 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 PYGLP06737 847 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 CTSEP14091 401 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 COILP38432 576 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 SPAM1P38567 509 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 MAZP56270 477 aaKnown RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 ILKQ13418 452 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 ZNF658BQ4V348 819 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 ANKRD22Q5VYY1 191 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 PDPK2PQ6A1A2 396 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 TAF8Q7Z7C8 310 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 PIANPQ8IYJ0 282 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 AGGF1Q8N302 714 aaeCLIP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 DCBLD1Q8N8Z6 715 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 RASGEF1AQ8N9B8 481 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 OR13J1Q8NGT2 312 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms