RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 TREX1Q9NSU2 369 aa16.31■□□□□ 0.2
LIM2-201ENST00000221973 ZC3H7BQ9UGR2 993 aaKnown RBP16.31■□□□□ 0.2
LIM2-201ENST00000221973 RIMKLBQ9ULI2 386 aa16.31■□□□□ 0.2
LIM2-201ENST00000221973 CA5BQ9Y2D0 317 aa16.31■□□□□ 0.2
LIM2-201ENST00000221973 BTBD3Q9Y2F9 522 aa16.31■□□□□ 0.2
LIM2-201ENST00000221973 RPS6KL1Q9Y6S9 549 aa16.31■□□□□ 0.2
LIM2-201ENST00000221973 TMEM131Q92545 1883 aa16.31■□□□□ 0.2
LIM2-201ENST00000221973 GLYATL1P3A0A0U1RQE8 302 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 A0A1W2PPC4 97 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 K7ESM1 405 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 DKK1O94907 266 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 CER1O95813 267 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 FAM153BP0C7A2 387 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 AKT2P31751 481 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 MAGEA4P43358 317 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 AFF3P51826 1226 aaKnown RBP16.3■□□□□ 0.2
LIM2-201ENST00000221973 CLDN2P57739 230 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 DCDC1P59894 354 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 PRAMEP78395 509 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 CBLBQ13191 982 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 AGERQ15109 404 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 SMAD1Q15797 465 aaKnown RBP16.3■□□□□ 0.2
LIM2-201ENST00000221973 CHRNA6Q15825 494 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 KIF19Q2TAC6 998 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 FAM153CQ494X1 144 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 ARMC3Q5W041 872 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 ZDHHC20Q5W0Z9 365 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 RAET1GQ6H3X3 334 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 LAYNQ6UX15 382 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 KDM7AQ6ZMT4 941 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 ZNF765Q7L2R6 523 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 TMEM135Q86UB9 458 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 PELI3Q8N2H9 469 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 EIF1ADQ8N9N8 165 aaKnown RBP16.3■□□□□ 0.2
LIM2-201ENST00000221973 PLA2G15Q8NCC3 412 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 OR6P1Q8NGX9 317 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 CDKN2AIPNLQ96HQ2 116 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 SERAC1Q96JX3 654 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
LIM2-201ENST00000221973 PLEKHG4BQ96PX9 1271 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 AGAP2Q99490 1192 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 KLF6Q99612 283 aaPredicted RBP16.3■□□□□ 0.2
LIM2-201ENST00000221973 NAT9Q9BTE0 207 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 SPATA16Q9BXB7 569 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 PHACTR1Q9C0D0 580 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 TSPYL1Q9H0U9 437 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 KCTD5Q9NXV2 234 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 DMTF1Q9Y222 760 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 SNX11Q9Y5W9 270 aa16.3■□□□□ 0.2
LIM2-201ENST00000221973 PTPRBP23467 1997 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CCDC162PA2VCL2 907 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 OR51F1A6NGY5 319 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 PRAMEF26H0Y7S4 382 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 USP1O94782 785 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 POLBP06746 335 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 PSMA3P25788 255 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CD27P26842 260 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 MC4RP32245 332 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 IGFALSP35858 605 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 NUDT1P36639 197 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 GPR1P46091 355 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 XIAPP98170 497 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 ACVR1Q04771 509 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 PEX6Q13608 980 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 HENMT1Q5T8I9 393 aaKnown RBP16.29■□□□□ 0.2
LIM2-201ENST00000221973 WDR93Q6P2C0 686 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 IL27RAQ6UWB1 636 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 UNC5AQ6ZN44 842 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CAPN12Q6ZSI9 719 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CEP128Q6ZU80 1094 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CCNJLQ8IV13 435 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 PALM2Q8IXS6 379 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 DENND6BQ8NEG7 585 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 PEX13Q92968 403 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 C19orf43Q9BQ61 176 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CDH19Q9H159 772 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 NFKBIL1Q9UBC1 381 aaPredicted RBP16.29■□□□□ 0.2
LIM2-201ENST00000221973 ANKRD6Q9Y2G4 727 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 PCDHGB2Q9Y5G2 931 aa16.29■□□□□ 0.2
LIM2-201ENST00000221973 CACNA1GO43497 2377 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 SMG1Q96Q15 3661 aaKnown RBP16.28■□□□□ 0.2
LIM2-201ENST00000221973 ZCWPW2A0A1B0GU75 182 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 H7C0S8 307 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 GAPDHSO14556 408 aaPredicted RBP16.28■□□□□ 0.2
LIM2-201ENST00000221973 FPGTO14772 594 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 GPR39O43194 453 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 UGT1A9O60656 530 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 SRP72O76094 671 aaKnown RBP16.28■□□□□ 0.2
LIM2-201ENST00000221973 VAPBO95292 243 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 PRAMEF1O95521 474 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 TTC4O95801 387 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 GOT2P00505 430 aaKnown RBP16.28■□□□□ 0.2
LIM2-201ENST00000221973 PAMP19021 973 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 UGT1A6P19224 532 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 UGT1A1P22309 533 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 UGT1A4P22310 534 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 MCM3P25205 808 aa16.28■□□□□ 0.2
LIM2-201ENST00000221973 UGT1A3P35503 534 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms