RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FOXM1Q08050 763 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 HDDC3Q8N4P3 179 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 SLC4A11Q8NBS3 891 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 LEMD2Q8NC56 503 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 KCNS3Q9BQ31 491 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 TMEM27Q9HBJ8 222 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 C2P06681 752 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 ALOX12P18054 663 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 ECHDC2Q86YB7 292 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 C4orf32Q8N8J7 132 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 STK32AQ8WU08 396 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 ATG10Q9H0Y0 220 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 DGKEP52429 567 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 IL10RBQ08334 325 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 FBXW8Q8N3Y1 598 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 RBM18Q96H35 190 aaKnown RBP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 PSMD13Q9UNM6 376 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 DAOAP59103 153 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 CCL14Q16627 93 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 TIGD2Q4W5G0 525 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 RPL10LQ96L21 214 aaKnown RBP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 TRAPPC9Q96Q05 1148 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 KIFC1Q9BW19 673 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 LRCH4O75427 683 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 CLDN9O95484 217 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 LARS2Q15031 903 aaKnown RBP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 TAB1Q15750 504 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 SPATA19Q7Z5L4 167 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 HEATR4Q86WZ0 1026 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 XAGE5Q8WWM1 108 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 KIR3DL1P43629 444 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 DLG2Q15700 870 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 GDF6Q6KF10 455 aaPredicted RBP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 MED27Q6P2C8 311 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 POMZP3Q6PJE2 187 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 DHDDSQ86SQ9 333 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 SLC9A6Q92581 669 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 DNASE1L2Q92874 299 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 DCUN1D5Q9BTE7 237 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 CDH19Q9H159 772 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 SRMSQ9H3Y6 488 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 PNPLA8Q9NP80 782 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 PRKAB1Q9Y478 270 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 TRAFD1O14545 582 aaPredicted RBP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 FFAR2O15552 330 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 AP2A1O95782 977 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 CFIP05156 583 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 LAMP2P13473 410 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 SPIRE1Q08AE8 756 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 C2orf80Q0P641 193 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 SLC44A4Q53GD3 710 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 TMEM220Q6QAJ8 160 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 ZNF662Q6ZS27 426 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 CIR1Q86X95 450 aaPredicted RBP18.84■□□□□ 0.61
SMPD3-201ENST00000219334 SH3RF2Q8TEC5 729 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 ABCB8Q9NUT2 735 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 NUDT4Q9NZJ9 180 aa18.84■□□□□ 0.61
SMPD3-201ENST00000219334 ATXN2Q99700 1313 aaKnown RBP18.83■□□□□ 0.61
SMPD3-201ENST00000219334 UGT2B17O75795 530 aa18.83■□□□□ 0.61
SMPD3-201ENST00000219334 ZIK1Q3SY52 487 aaPredicted RBP18.83■□□□□ 0.61
SMPD3-201ENST00000219334 SEC14L3Q9UDX4 400 aa18.83■□□□□ 0.61
SMPD3-201ENST00000219334 HEBP2Q9Y5Z4 205 aa18.83■□□□□ 0.61
SMPD3-201ENST00000219334 CNKSR3Q6P9H4 555 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 HCN3Q9P1Z3 774 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 IQCF5A8MTL0 148 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 TM7SF2O76062 418 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 IPO13O94829 963 aaKnown RBP18.83■□□□□ 0.6
SMPD3-201ENST00000219334 PSMG1O95456 288 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 ZNF37AP17032 561 aaPredicted RBP18.83■□□□□ 0.6
SMPD3-201ENST00000219334 FSHRP23945 695 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 UBR7Q8N806 425 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 CLHC1Q8NHS4 586 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 SHDQ96IW2 340 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 CRISPLD1Q9H336 500 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 CHRAC1Q9NRG0 131 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.83■□□□□ 0.6
SMPD3-201ENST00000219334 SYN1P17600 705 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 HNRNPDQ14103 355 aaKnown RBP18.83■□□□□ 0.6
SMPD3-201ENST00000219334 PDGFRLQ15198 375 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 FAM129CQ86XR2 697 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 ALG3Q92685 438 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 TNFRSF25Q93038 417 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 ALKBH4Q9NXW9 302 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 SH3GLB1Q9Y371 365 aa18.83■□□□□ 0.6
SMPD3-201ENST00000219334 FAM86C2PA6NEL3 165 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 OR1F1O43749 312 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 SERPINA6P08185 405 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 S100GP29377 79 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 CCNIQ14094 377 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 SLC10A6Q3KNW5 377 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 KLHL17Q6TDP4 642 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 MON1BQ7L1V2 547 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 SERPINA9Q86WD7 417 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 PROSER1Q86XN7 944 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 PCBD2Q9H0N5 130 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 MRPS7Q9Y2R9 242 aaKnown RBP18.82■□□□□ 0.6
SMPD3-201ENST00000219334 A0A1W2PRU2 124 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 SNX3O60493 162 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 HOXB6P17509 224 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms