RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 CEPT1Q9Y6K0 416 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 TGDSO95455 350 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 XRCC1P18887 633 aaPredicted RBP12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 ME2P23368 584 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 MZF1P28698 734 aaPredicted RBP12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 MC4RP32245 332 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 AHI1Q8N157 1196 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 NTAN1Q96AB6 310 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 MYEOVQ96EZ4 313 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 KCNA7Q96RP8 456 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC9A7Q96T83 725 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 HMX2A2RU54 273 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 TOR1BO14657 336 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 MRASO14807 208 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 BIRC5O15392 142 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 CXCL14O95715 111 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 CLIC3O95833 236 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 BCL10O95999 233 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 XIAPP98170 497 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 OTUD3Q5T2D3 398 aaPredicted RBP12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 DNAJB7Q7Z6W7 309 aaPredicted RBP12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 SNX29P2Q8IUI4 249 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 MAPK15Q8TD08 544 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 ACMSDQ8TDX5 336 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 PBXIP1Q96AQ6 731 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 CLIP3Q96DZ5 547 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 ADNPQ9H2P0 1102 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 ASB8Q9H765 288 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 CXorf21Q9HAI6 301 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 RAI2Q9Y5P3 530 aa12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 TNS1Q9HBL0 1735 aaKnown RBP12.86□□□□□ -0.35
PCDHB4-201ENST00000194152 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ACSL4O60488 711 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ZNF182P17025 639 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CKMT2P17540 419 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MRPS15P82914 257 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC18A2Q05940 514 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 LSM12Q3MHD2 195 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 TMEM26Q6ZUK4 368 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 UROC1Q96N76 676 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CDH19Q9H159 772 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 COQ10BQ9H8M1 238 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MOCS1Q9NZB8 636 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 C6orf203Q9P0P8 240 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 PNMA8BQ9ULN7 279 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 Q9Y3F1 56 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 NPEPPSL1A6NEC2 478 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 OR1I1O60431 355 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 DLX3O60479 287 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ZNF623O75123 536 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CYBBP04839 570 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MLNP12872 115 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 RHOQP17081 205 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CDK9P50750 372 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 HNRNPDQ14103 355 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 TSNQ15631 228 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 PPP1R3AQ16821 1122 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ZNF423Q2M1K9 1284 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 Q6ZNX1 250 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 SZRD1Q7Z422 152 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 C2orf73Q8N5S3 287 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CLHC1Q8NHS4 586 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 APBB2Q92870 758 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 OSBPL10Q9BXB5 764 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ZFP14Q9HCL3 533 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 GIN1Q9NXP7 522 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 RAB26Q9ULW5 256 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 NUP214P35658 2090 aaPredicted RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 TAF4O00268 1085 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 PPP6CO00743 305 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 INPP4BO15327 924 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ITGAXP20702 1163 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 NDST2P52849 883 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MARVELD2Q8N4S9 558 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 OR4L1Q8NH43 312 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 DNAJB14Q8TBM8 379 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MRGPRX2Q96LB1 330 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 SLC22A12Q96S37 553 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 SMOC2Q9H3U7 446 aa12.85□□□□□ -0.35
PCDHB4-201ENST00000194152 MTG2Q9H4K7 406 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms