RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 FAM120BQ96EK7 910 aaKnown RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 SLC9A7Q96T83 725 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 ACAT2Q9BWD1 397 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 A0A087X1B8 175 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 MYOCOSA0A1B0GUC4 107 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 LINC00854A0A1B0GVQ3 168 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 I6L893 689 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 STC2O76061 302 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF7P17097 686 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 GCAP28676 217 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 THOP1P52888 689 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 PCLAFQ15004 111 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 PLCL1Q15111 1095 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 AARS2Q5JTZ9 985 aaKnown RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 PQLC1Q8N2U9 271 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 WBP2Q969T9 261 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 SLC7A6OSQ96CW6 309 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 FAXDC2Q96IV6 333 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 IGSF9Q9P2J2 1179 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 RANBP2P49792 3224 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 A0A0J9YYE9 177 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 CCDC162PA2VCL2 907 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 NIPSNAP2O75323 286 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 RFX3P48380 749 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 SPDYE7PQ495Y7 208 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 SAMD4BQ5PRF9 694 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 UTS2BQ765I0 119 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 GPR156Q8NFN8 814 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 OR56A4Q8NGH8 313 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 NTAN1Q96AB6 310 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 TSSK3Q96PN8 268 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 RAD9AQ99638 391 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 IL23AQ9NPF7 189 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 CYLDQ9NQC7 956 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 LRRC14BA6NHZ5 514 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF189O75820 626 aaPredicted RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 TGDSO95455 350 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 IGSF6O95976 241 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 RHOP08100 348 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 MAT2AP31153 395 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 SLC18A2Q05940 514 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF621Q6ZSS3 439 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF555Q8NEP9 628 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 PNPT1Q8TCS8 783 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 TPD52L3Q96J77 140 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 DACH2Q96NX9 599 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 KCNA7Q96RP8 456 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 HAPLN3Q96S86 360 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 CDK5RAP1Q96SZ6 601 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF334Q9HCZ1 680 aaPredicted RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 DCLK1O15075 740 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 CKMT2P17540 419 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 PTPN2P17706 415 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 LPOP22079 712 aaPredicted RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 ALDH9A1P49189 494 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 TSTD2Q5T7W7 516 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 UGT3A1Q6NUS8 523 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 FBXL19Q6PCT2 694 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 BNIPLQ7Z465 357 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 ZC3HC1Q86WB0 502 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 CENPLQ8N0S6 344 aaPredicted RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 FOPNLQ96NB1 174 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 PANX3Q96QZ0 392 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 DGCR6LQ9BY27 220 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 EXOSC4Q9NPD3 245 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 MTRRQ9UBK8 725 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 OPTCQ9UBM4 332 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 EIF2B4Q9UI10 523 aaKnown RBP11.99□□□□□ -0.49
CHPF2-201ENST00000035307 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 PTGDR2Q9Y5Y4 395 aa11.99□□□□□ -0.49
CHPF2-201ENST00000035307 NRP2O60462 931 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 NR4A1P22736 598 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 PRKCHP24723 683 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CCNCP24863 283 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 GSTT1P30711 240 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 HSPA7P48741 367 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 LSM3P62310 102 aaKnown RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 IRX1P78414 480 aaPredicted RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CDC16Q13042 620 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 PPP1R3AQ16821 1122 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 AASDHQ4L235 1098 aaPredicted RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 GRAMD4Q6IC98 578 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CES5AQ6NT32 575 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CHST9Q7L1S5 443 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 TRMT11Q7Z4G4 463 aaKnown RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 APCDD1Q8J025 514 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SIDT2Q8NBJ9 832 aaKnown RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 RP9Q8TA86 221 aaKnown RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SELENOMQ8WWX9 145 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SH3GL3Q99963 347 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 ATG10Q9H0Y0 220 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CACYBPQ9HB71 228 aaKnown RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SLC13A4Q9UKG4 626 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 TRBV23OR9-2A0A075B6M9 112 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 ZBTB11O95625 1053 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms