RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 NEK6Q9HC98 313 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 COMMD8Q9NX08 183 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 SAGE2PA6NJ88 616 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 GUCA1CO95843 209 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 MT-ND1P03886 318 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 IL6P05231 212 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 AKR1A1P14550 325 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC7A2P52569 658 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 CYP4F2P78329 520 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 COX10Q12887 443 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 DPYSL2Q16555 572 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 ZCCHC8Q6NZY4 707 aaKnown RBP12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 TBC1D21Q8IYX1 336 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 KBTBD8Q8NFY9 601 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 HDAC10Q969S8 669 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 ASB2Q96Q27 587 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 MARCH2Q9P0N8 246 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 VPS28Q9UK41 221 aa12.09□□□□□ -0.47
TSPAN9-201ENST00000011898 CCDC154A6NI56 674 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ARIH2O95376 493 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 C22orf31O95567 290 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 CRYZL1O95825 349 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 SLC2A4P14672 509 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 HOXB8P17481 243 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ITGB6P18564 788 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 PRMT2P55345 433 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 HERC3Q15034 1050 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 PKN3Q6P5Z2 889 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 IGDCC3Q8IVU1 814 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 RTL3Q8N8U3 475 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ITFG1Q8TB96 612 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 DNAJB14Q8TBM8 379 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 CD99L2Q8TCZ2 262 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 PTCD3Q96EY7 689 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 AGAP2Q99490 1192 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 TPK1Q9H3S4 243 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ATP13A1Q9HD20 1204 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 VWA7Q9Y334 891 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 PTCH2Q9Y6C5 1203 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 A8MV72 311 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 YAP1P46937 504 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 LILRA4P59901 499 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 OLR1P78380 273 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 NCF4Q15080 339 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 CYP2A13Q16696 494 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ANKDD1AQ495B1 522 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 RRM2BQ7LG56 351 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ARMC8Q8IUR7 673 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 STAG3L4Q8TBR4 150 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 EPB41L4BQ9H329 900 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 TRPV2Q9Y5S1 764 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 FAM240BA0A1B0GVZ2 78 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 RECQL5O94762 991 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 LRIG2O94898 1065 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 IDH3AP50213 366 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ARHGEF7Q14155 803 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 KCNJ11Q14654 390 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 C1QTNF12Q5T7M4 302 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 DDI2Q5TDH0 399 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 PPP4R4Q6NUP7 873 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 SYCE2Q6PIF2 218 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ELMOD1Q8N336 334 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 VPS37AQ8NEZ2 397 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 FBXO30Q8TB52 745 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 SEMA3CQ99985 751 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ADI1Q9BV57 179 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ACTR8Q9H981 624 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 POLE3Q9NRF9 147 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 CRNNQ9UBG3 495 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ST3GAL5Q9UNP4 418 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 ERVK-11Q9UQG0 969 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
TSPAN9-201ENST00000011898 IFNA16P05015 189 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 CDH1P12830 882 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 HGFP14210 728 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 AIF1P55008 147 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 RHOAP61586 193 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 IRF5Q13568 498 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 SQLEQ14534 574 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 SOWAHAQ2M3V2 549 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 C15orf39Q6ZRI6 1047 aa12.07□□□□□ -0.48
TSPAN9-201ENST00000011898 PRR23BQ6ZRT6 265 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms