RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PLEKHM3Q6ZWE6 761 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 LUZP2Q86TE4 346 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ZC3H7AQ8IWR0 971 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 DCAF4L2Q8NA75 395 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 GPR62Q9BZJ7 368 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ARMCX1Q9P291 453 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PCDHGB3Q9Y5G1 929 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 TRAFD1O14545 582 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PDE9AO76083 593 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CLDN9O95484 217 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CRHR1P34998 444 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 BUD31P41223 144 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 GNPDA1P46926 289 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CYP4F2P78329 520 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 LY6G5CQ5SRR4 150 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CRELD2Q6UXH1 353 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CUZD1Q86UP6 607 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CAMK1DQ8IU85 385 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 C2orf73Q8N5S3 287 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PANX1Q96RD7 426 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ZSCAN5AQ9BUG6 496 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 DUSP12Q9UNI6 340 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PSMD13Q9UNM6 376 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 TRAF6Q9Y4K3 522 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 H3BN98 237 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CNOT3O75175 753 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PIAS1O75925 651 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 TCF3P15923 654 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PAICSP22234 425 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 VIPR1P32241 457 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 HSD17B2P37059 387 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ACTR1BP42025 376 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CDH13P55290 713 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ACTR1AP61163 376 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 C1DQ13901 141 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ACAP2Q15057 778 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CCNYL2Q5T2Q4 361 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 SULT1C3Q6IMI6 304 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 LDB1Q86U70 411 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 TMEM139Q8IV31 216 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 C12orf66Q96MD2 445 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 TNFP01375 233 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 FYNP06241 537 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF30P17039 623 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 PSMC3P17980 439 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 NMBRP28336 390 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 MPP1Q00013 466 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 MED27Q6P2C8 311 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ZFP1Q6P2D0 407 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 Q6ZVU0 165 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 TRABD2AQ86V40 505 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 CMASQ8NFW8 434 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 REEP1Q9H902 201 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 CARS2Q9HA77 564 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF490Q9ULM2 529 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 TULP2O00295 520 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ADH1BP00325 375 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ASMTP46597 345 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 MANFP55145 182 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SEMA5AQ13591 1074 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 FBXW10Q5XX13 1052 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 TAS1R3Q7RTX0 852 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SCAIQ8N9R8 606 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 NACC2Q96BF6 587 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF180Q9UJW8 692 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 AJAP1Q9UKB5 411 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 MFHAS1Q9Y4C4 1052 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 KDELR3O43731 214 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SERPINB7O75635 380 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC25A12O75746 678 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ARRB1P49407 418 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SMIM11AP58511 58 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SUZ12Q15022 739 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 LRRC73Q5JTD7 316 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 VN1R5Q7Z5H4 357 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 POP5Q969H6 163 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC22A18Q96BI1 424 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 P2RY13Q9BPV8 354 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ATG10Q9H0Y0 220 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 SETD1AO15047 1707 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 NEMP2A6NFY4 417 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 UPK3BL1B0FP48 263 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 UPK3BL2E5RIL1 263 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 CCL22O00626 93 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 MAN2B1O00754 1011 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 RFXANKO14593 260 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 HCRTO43612 131 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 HLA-DQB2P05538 268 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 STXBP1P61764 594 aaKnown RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 CPTPQ5TA50 214 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 NCBP2-AS2Q69YL0 99 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF784Q8NCA9 323 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 PTPN18Q99952 460 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 KXD1Q9BQD3 176 aa10.28□□□□□ -0.76
NIPAL3-201ENST00000003912 C1orf50Q9BV19 199 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms