RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Sh3gl3Q62421 347 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 CilpQ66K08 1184 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Q6GQU0 248 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Fam126aQ6P9N1 521 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 CpmQ80V42 443 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Serpinb9dQ8BMT0 377 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Ccdc134Q8C7V8 229 aa30.21■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Dhx35A2ACQ1 703 aaKnown RBP30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Klc2O88448 599 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 HmgclP38060 325 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Q3UTZ3 580 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Ankzf1Q80UU1 748 aaKnown RBP30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Stkld1Q80YS9 662 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Tmtc4Q8BG19 741 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 CopaQ8CIE6 1224 aaKnown RBP30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Gtf3c1Q8K284 2101 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Irf2bp1Q8R3Y8 584 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Pycr2Q922Q4 320 aaKnown RBP30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Dgat2Q9DCV3 388 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Cmtm7Q9ESD6 167 aa30.2■■■□□ 2.43
Ctdnep1-201ENSMUST00000108593 Plxna2P70207 1894 aa30.2■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Colca2F8VPY8 239 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Ifnar2O35664 513 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Hk3Q3TRM8 922 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Armc5Q5EBP3 926 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Sema3dQ8BH34 777 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Cox15Q8BJ03 413 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Vps35Q9EQH3 796 aaKnown RBP30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Cog1Q9Z160 980 aa30.19■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Gbp11A9YVJ5 442 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Adamts14E9PX39 1209 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Mtnd3P03899 115 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 FurinP23188 793 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Lingo4Q149C3 593 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Fam98aQ3TJZ6 515 aaKnown RBP30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Pabpc5Q8C7D3 381 aaKnown RBP30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Hectd2Q8CDU6 774 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 RtbdnQ8QZY4 247 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Lcn9Q9D267 178 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Tm9sf3Q9ET30 587 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 XkQ9QXY7 446 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Tmem196V9GX04 182 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Vwa5b1A9Z1V5 1215 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Mpig6bD7PDD4 242 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Kpna2P52293 529 aaKnown RBP30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Adam2Q60718 735 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Npsr1Q8BZP8 371 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Ppp4r4Q8C0Y0 875 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Creb3l4Q9D2A5 370 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Phf10Q9D8M7 497 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Dusp21Q9D9D8 189 aa30.18■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Atg2bQ80XK6 2075 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Mup18A2BIM8 181 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 MipepA6H611 711 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Akr1b10G5E895 316 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Dusp8O09112 663 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Sod3O09164 251 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 MaffO54791 156 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Mup11P04938 181 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Smad1P70340 465 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Dact3Q0PHV7 610 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Gm21320Q4FZE8 181 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Lrrc8bQ5DU41 803 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Ubfd1Q78JW9 368 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Chil6Q80W26 440 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Nat14Q8BVG8 206 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Rab43Q8CG50 210 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Slc22a6Q8VC69 545 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Marveld3Q9D956 376 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 RgrQ9Z2B3 291 aa30.17■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 CerklA2AQH1 525 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Gm3173A6NAS3 172 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Cisd3B1AR13 137 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Mmrn1B2RPV6 1210 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Spin2fJ3QPU0 254 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Ypel5P62700 121 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Prss48Q14B25 312 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Msto1Q2YDW2 556 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Hbq1bQ3U0A6 142 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Lilrb4Q64281 335 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Prr18Q6PAN7 307 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Sass6Q80UK7 654 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Nmur2Q8BZ39 395 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Pcdha5Q91Y15 934 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Ccdc124Q9D8X2 217 aaKnown RBP30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Gpatch1Q9DBM1 930 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Slc25a14Q9Z2B2 325 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Dock6Q8VDR9 2080 aa30.16■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Ttll11A4Q9F4 727 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Zfp277E9Q6D6 583 aaKnown RBP30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Cr2P19070 1025 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Clec4fP70194 548 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Hoxc4Q08624 264 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Snx21Q3UR97 363 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Drc1Q3USS3 753 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 ScinQ60604 715 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 MelkQ61846 643 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Sf1Q64213 653 aaKnown RBP30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Tmc6Q7TN60 810 aa30.15■■■□□ 2.42
Ctdnep1-201ENSMUST00000108593 Hdac7Q8C2B3 938 aa30.15■■■□□ 2.42
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms