RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gm2897K7N6T7 172 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hoxd12P23812 268 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Nckap1P28660 1128 aaKnown RBP9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ranbp9P69566 653 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 CdonQ32MD9 1250 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fam81aQ3UXZ6 364 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ggt1Q60928 568 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Atp2a3Q64518 1038 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Brsk2Q69Z98 735 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ints7Q7TQK1 966 aaKnown RBP9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ppm1lQ8BHN0 360 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Znf775Q8BI73 538 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Aph1bQ8C7N7 257 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mta3Q924K8 591 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zfp655Q9CZP3 541 aaKnown RBP9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Senp8Q9D2Z4 221 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Il20Q9JKV9 176 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dcun1d1Q9QZ73 259 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc25a14Q9Z2B2 325 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ccdc13D3YV10 709 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr603L7N1Y4 312 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 P01636 108 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tmem207P86045 143 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Htr4P97288 388 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cry1P97784 606 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ppp1r7Q3UM45 361 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 GpamQ61586 827 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sarm1Q6PDS3 724 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ssxb3Q6XAS4 170 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mvb12aQ78HU3 271 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pknox2Q8BG99 474 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cnot10Q8BH15 744 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tgif2lx2Q8K5B9 231 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 HnrnplQ8R081 586 aaKnown RBP9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 L2hgdhQ91YP0 464 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ankra2Q99PE2 312 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rgs19Q9CX84 216 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Oma1Q9D8H7 521 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 RhojQ9ER71 214 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gucy1a3Q9ERL9 691 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hes6Q9JHE6 224 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pik3cgQ9JHG7 1102 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ascl3Q9JJR7 174 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 DonsonQ9QXP4 560 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Map1bP14873 2464 aaKnown RBP9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ighg3A0A1Y7VJN6 399 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Serpina3jD3Z451 420 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Vmn2r112L7N221 857 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rps14P62264 151 aaKnown RBP9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cd80Q00609 306 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hbq1bQ3U0A6 142 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Nfatc2Q60591 927 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Krt77Q6IFZ6 572 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Svs1Q6WIZ7 820 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Acat3Q80X81 397 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 B3gnt5Q8BGY6 376 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zfp449Q8CB76 518 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr448Q8VES9 310 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rin1Q921Q7 763 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zswim2Q9D9X6 631 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Coro1cQ9WUM4 474 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Crybg1A0A0G2JG52 2065 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm9774A0A0A6YVU8 407 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pcna-ps2A0A140T8V5 261 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ttc30a2A2AKQ8 664 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm3187M0QWW3 260 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Kpna3O35344 521 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rasgrf2P70392 1189 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Anxa4P97429 319 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cdk18Q04899 451 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Nab1Q61122 486 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr1505Q7TQQ2 316 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Chil6Q80W26 440 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Parp9Q8CAS9 866 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 CcinQ8CDE2 588 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pcdhb7Q8CDY9 829 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Usp27Q8CEG8 438 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Calhm5Q8R100 309 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Thoc1Q8R3N6 657 aaKnown RBP9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mrgpra2Q91WW4 305 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr459Q924H8 314 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ttc30a1Q99J38 664 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Foxp3Q99JB6 429 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ttc30bQ9CY00 664 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dus2Q9D7B1 493 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cmtm7Q9ESD6 167 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zc3h7aE9PWW6 970 aaKnown RBP9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Il1rnP25085 178 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 PpargP37238 505 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Jak2Q62120 1129 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tpgs2Q66JT5 296 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zbtb42Q811H0 420 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hdac7Q8C2B3 938 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr1176Q8VG40 315 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Camk1gQ91VB2 477 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ubap2Q91VX2 1132 aaKnown RBP9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Anxa13Q99JG3 317 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc26a5Q99NH7 744 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 ClpsQ9CQC2 113 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mrpl57Q9CQF8 102 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 91.9 ms