RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Pabpc2Q62029 628 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tas2r109Q7M707 316 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tmem108Q8BHE4 574 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 PolbQ8K409 335 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Foxe1Q8R2I0 371 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tbc1d20Q9D9I4 402 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Kcna10B2RQA1 511 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Olfr603L7N1Y4 312 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Sult3a1O35403 293 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ifrd1P19182 449 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 S100bP50114 92 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Mrpl10Q3TBW2 262 aaKnown RBP22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Zbtb2Q3V3W4 514 aaKnown RBP22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Arhgef15Q5FWH6 849 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Arhgef38Q80VK6 770 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Slc41a1Q8BJA2 512 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Rcn2Q8BP92 320 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Toe1Q9D2E2 511 aa22.76■■□□□ 1.23
Upf3a-201ENSMUST00000043767 UmpsP13439 481 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Stmn2P55821 179 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 A1bgQ19LI2 512 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ccdc127Q3TC33 260 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Als2clQ60I26 952 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 MelkQ61846 643 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ahcyl1Q80SW1 530 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Atg16l1Q8C0J2 607 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ptcd2Q8R3K3 381 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tmem168Q91VX9 697 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Necab2Q91ZP9 389 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ndc80Q9D0F1 642 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Actrt1Q9D9J3 376 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 SrpraQ9DBG7 636 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cyp2g1Q9WV19 494 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gm10250G3X9L6 160 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gm3488M0QW81 238 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Galnt4O08832 578 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Hmx2P43687 273 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Klf1P46099 358 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Mtf2Q02395 593 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Serpina3gQ5I2A0 440 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Utp14bQ6EJB6 756 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Atoh8Q99NA2 322 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tomm20lQ9D4V6 152 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cnbd2Q9D5U8 673 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Rpl4Q9D8E6 419 aaKnown RBP22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Dtwd1Q9D8U7 304 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Atp5hQ9DCX2 161 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Nt5cQ9JM14 200 aa22.75■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cdr1E9Q0B4 517 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 MlxO08609 298 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pou5f1P20263 352 aaKnown RBP22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Rpl26P61255 145 aaKnown RBP22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Nudt18Q3U2V3 323 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Eif2dQ61211 570 aaKnown RBP22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tmem164Q6PHN7 296 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Sort1Q6PHU5 825 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Kxd1Q80XH1 177 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Zfyve1Q810J8 777 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 B3gnt5Q8BGY6 376 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 SgtaQ8BJU0 315 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tubgcp5Q8BKN5 1024 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Snx15Q91WE1 337 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Taf7lQ9D3R9 471 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pus10Q9D3U0 527 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pebp4Q9D9G2 242 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 HemgnQ9ERZ0 503 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Kat2bQ9JHD1 813 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 AicdaQ9WVE0 198 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 CpqQ9WVJ3 470 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Vps13aQ5H8C4 3166 aa22.74■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Kpna7C0LLJ0 499 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gm7714E9Q079 131 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Vmn2r85G3UW56 850 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gm20509G3UZF1 325 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cyp2b19O55071 492 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Fbp2P70695 339 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cyb5r2Q3KNK3 276 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Fam91a1Q3UVG3 837 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Q3UY34 256 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 RfflQ6ZQM0 377 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Morc4Q8BMD7 928 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Exd1Q8CDF7 570 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Unc5aQ8K1S4 898 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 NoboxQ8VIH1 527 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 GcshQ91WK5 170 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 ProzQ9CQW3 399 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cmtm8Q9CZR4 173 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Vmn2r94E9PZK8 818 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pdzd7E9Q9W7 1021 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 P01636 108 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 HdcP23738 662 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 TecP24604 630 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 PrkcdP28867 674 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pou2f3P31362 431 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ptger4P32240 513 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tmc7Q8C428 726 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cts3Q91ZD5 332 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Spz1Q99MY0 378 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gpr63Q9EQQ3 425 aa22.73■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pcsk5Q04592 1877 aa22.73■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms