RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Trove2O08848 538 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 ComtO88587 265 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 P01668 110 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 GlulP15105 373 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Acvr1P37172 509 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rin3P59729 980 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gpr165Q3V3A3 455 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Glp2rQ5IXF8 512 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Itm2aQ61500 263 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ddhd1Q80YA3 547 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Slc8a2Q8K596 921 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 GcshQ91WK5 170 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pcdhga10Q91XY9 930 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Homer3Q99JP6 356 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Glod4Q9CPV4 298 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Snx2Q9CWK8 519 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cmtm8Q9CZR4 173 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Get4Q9D1H7 327 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pebp4Q9D9G2 242 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 HaghlQ9DB32 283 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ak1Q9R0Y5 194 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Il18rapQ9Z2B1 614 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ern2Q9Z2E3 911 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mcf2A2AEU1 1111 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cldn34b1B1AZQ8 209 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Kpna7C0LLJ0 499 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dnmt3aO88508 908 aaKnown RBP8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 JunP05627 334 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Prl3b1P09586 222 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 CtsdP18242 410 aaKnown RBP8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Bmp2P21274 394 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Uba1yP31254 1058 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fdft1P53798 416 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Polr2lP62876 67 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hrh1P70174 488 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 A1bgQ19LI2 512 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Bpifb1Q61114 474 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nt5eQ61503 576 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Uts2bQ765I1 113 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ppm1nQ8BGL1 404 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Wasf2Q8BH43 497 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Man2a2Q8BRK9 1152 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Adprhl2Q8CG72 370 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tgif2lx2Q8K5B9 231 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam161aQ8QZV6 448 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 NeproQ8R2U2 564 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr448Q8VES9 310 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 NoboxQ8VIH1 527 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 L2hgdhQ91YP0 464 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ackr4Q924I3 350 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 KlbQ99N32 1043 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cmc1Q9CPZ8 106 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nipsnap3bQ9CQE1 247 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Coro7Q9D2V7 922 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cldn34b2Q9D9N2 209 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Csnk1dQ9DC28 415 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 RalbQ9JIW9 206 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cldn7Q9Z261 211 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Igkv10-95A0A0G2JFY3 115 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc194A0A140LIT1 234 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm13119B1ARV5 481 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Apba1B2RUJ5 842 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Raph1F2Z3U3 1266 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r85G3UW56 850 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pabpc4lG5E8X2 370 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sec22bO08547 215 aaKnown RBP8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Klf6O08584 283 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 MaffO54791 156 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Stam2O88811 523 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 CalrP14211 416 aaKnown RBP8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 TigitP86176 249 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fpr-rs6Q3SXG2 339 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Prmt9Q3U3W5 846 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 OtulinQ3UCV8 352 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ppm1hQ3UYC0 513 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Myo1gQ5SUA5 1024 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 BadQ61337 204 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Atg16l1Q8C0J2 607 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cog4Q8R1U1 785 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ankra2Q99PE2 312 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pbld2Q9CXN7 288 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sun1Q9D666 913 aaKnown RBP8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tbc1d20Q9D9I4 402 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Bscl2Q9Z2E9 383 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Plce1Q8K4S1 2282 aa8.65□□□□□ -1.02
Trim39-201ENSMUST00000042717 Adam34A2RSG8 714 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Zfp788E9Q980 884 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tekt5G5E8A8 557 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Nthl1O35980 300 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 KitP05532 979 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Scd1P13516 355 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 BpgmP15327 259 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mthfd2P18155 350 aaKnown RBP8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 PnpP23492 289 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Sash1P59808 1230 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 TekQ02858 1122 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pfdn6Q03958 127 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Eif2ak2Q03963 515 aaKnown RBP8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Spag6Q3V0U9 509 aa8.65□□□□□ -1.03
Trim39-201ENSMUST00000042717 Fam46cQ5SSF7 391 aa8.65□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms