RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Cbfa2t3O54972 620 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ptpn1P35821 432 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Q6P2K3 674 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AftphQ80WT5 931 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prap1Q80XD8 149 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cers6Q8C172 384 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ftsj1Q8CBC7 324 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Map2k7Q8CE90 535 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zswim3Q8CFL8 695 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pdcd10Q8VE70 212 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nck1Q99M51 377 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CutalQ9D1U5 156 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MecrQ9DCS3 373 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tor1aQ9ER39 333 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MipepA6H611 711 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 ChkaO54804 453 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Smad5P97454 465 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mef2dQ63943 514 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 VclQ64727 1066 aaKnown RBP10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Senp5Q6NXL6 749 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tas2r104Q7M723 302 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Arhgef38Q80VK6 770 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slfnl1Q8BHW9 410 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Adgrg2Q8CJ12 1009 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Aspscr1Q8VBT9 550 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fam96aQ9DCL2 160 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Adgrb1Q3UHD1 1582 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Atf4Q06507 349 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Znf367Q0VDT2 340 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Scrn3Q3TMH2 418 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cyp2c66Q5GLZ0 490 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc39a4Q78IQ7 660 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tas2r125Q7M710 311 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 FicdQ8BIX9 458 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gulp1Q8K2A1 304 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc12a9Q99MR3 914 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ska1Q9CPV1 254 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CcniQ9Z2V9 377 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr1200A2ATJ4 336 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Adamts6D3Z1A5 1117 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lamp2P17047 415 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pou2f3P31362 431 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Igfbp4P47879 254 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tapt1Q4VBD2 564 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Znrf3Q5SSZ7 913 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dnajc16Q80TN4 772 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc46a2Q8CA03 479 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fam25cQ8CF02 89 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fndc5Q8K4Z2 209 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mrpl9Q99N94 265 aaKnown RBP10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nudt17Q9CWD3 296 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 QpctQ9CYK2 362 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cst11Q9D269 139 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prl2b1Q9DAZ2 228 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tgm7A2ART8 616 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lipo4D3Z608 396 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cntnap3E9PY62 1287 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fth1P09528 182 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Amigo2Q80ZD9 519 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Catsper4Q8BVN3 442 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mnd1Q8K396 205 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cers2Q924Z4 380 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Map3k14Q9WUL6 942 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CltcQ68FD5 1675 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Spin2-ps6A0A140T8V2 174 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Herc6F2Z461 1003 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ptpn12P35831 775 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Smpdl3bP58242 456 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Acad9Q8JZN5 625 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tceal3Q8R0A5 200 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tmem176aQ9DCS1 244 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 DguokQ9QX60 277 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm30302A0A1Y7VN40 1110 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CercamA3KGW5 592 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 PdgfrbP05622 1098 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Htr3aP23979 487 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cers1P27545 350 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cxcr5Q04683 374 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Q3UJP5 209 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cd37Q61470 281 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prkd1Q62101 918 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr1062Q7TR71 315 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Col16a1Q8BLX7 1580 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 VcpkmtQ8C436 228 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kctd15Q8K0E1 283 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr183Q8VFB9 309 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Chil4Q91Z98 402 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cyp4f3Q99N16 524 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Stk19Q9JHN8 254 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mpp2Q9WV34 552 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm13101A2ASJ0 481 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm13119B1ARV5 481 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Spaca6E9Q8Q8 339 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cdh1P09803 884 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Polr1cP52432 346 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 E2f2P56931 443 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zyg11bQ3UFS0 744 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Stard3Q61542 446 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ttyh3Q6P5F7 524 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tatdn1Q6P8M1 295 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms