RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 MBTPS2O43462 519 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 NIPSNAP2O75323 286 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 PRNPP04156 253 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 EPHX1P07099 455 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 CCDC166P0CW27 439 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 GM2AP17900 193 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 BST1Q10588 318 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 ENPP2Q13822 863 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 RNF187Q5TA31 235 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-232ENST00000641947 TTC7BQ86TV6 843 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 TMIEQ8NEW7 156 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 HCAR2Q8TDS4 363 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 TSPAN17Q96FV3 270 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-232ENST00000641947 PITPNM3Q9BZ71 974 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 UBE2ZQ9H832 354 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-232ENST00000641947 XPR1Q9UBH6 696 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 APPL1Q9UKG1 709 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 TMPRSS11EQ9UL52 423 aa17.48■□□□□ 0.39
PHGDH-232ENST00000641947 AGAP14A8MT82 685 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 KLF11O14901 512 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 SNX3O60493 162 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 CYP2A6P11509 494 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-232ENST00000641947 ITGB7P26010 798 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 ACRV1P26436 265 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 ARRB2P32121 409 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 KIR2DL1P43626 348 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-232ENST00000641947 SEC13P55735 322 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 AARS2Q5JTZ9 985 aaKnown RBP17.47■□□□□ 0.39
PHGDH-232ENST00000641947 GIMAP7Q8NHV1 300 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 THOC1Q96FV9 657 aaKnown RBP17.47■□□□□ 0.39
PHGDH-232ENST00000641947 P2RY13Q9BPV8 354 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 FAM50BQ9Y247 325 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 PRSS21Q9Y6M0 314 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 STON1Q9Y6Q2 735 aa17.47■□□□□ 0.39
PHGDH-232ENST00000641947 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 PKMP14618 531 aaKnown RBP17.46■□□□□ 0.39
PHGDH-232ENST00000641947 HNRNPLP14866 589 aaKnown RBP eCLIP17.46■□□□□ 0.39
PHGDH-232ENST00000641947 CPA3P15088 417 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ZNF37AP17032 561 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ITGALP20701 1170 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 CTHP32929 405 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ETV3P41162 512 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 PTGER3P43115 390 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ARHGEF7Q14155 803 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ATP13A5Q4VNC0 1218 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 TECRLQ5HYJ1 363 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 TBC1D1Q86TI0 1168 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-232ENST00000641947 LCA5Q86VQ0 697 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 MMAAQ8IVH4 418 aaKnown RBP17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ZNF398Q8TD17 642 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 SCYL1Q96KG9 808 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 PLEKHG4BQ96PX9 1271 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 TSSK1BQ9BXA7 367 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 NSRP1Q9H0G5 558 aaKnown RBP17.46■□□□□ 0.39
PHGDH-232ENST00000641947 ABCG8Q9H221 673 aa17.46■□□□□ 0.39
PHGDH-232ENST00000641947 SPECC1L-ADORA2AF8WAN1 911 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 SNNO75324 88 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 RHOBTB1O94844 696 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 IL1BP01584 269 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 LTA4HP09960 611 aaKnown RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 NEFHP12036 1026 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 ZNF30P17039 623 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 ADARP55265 1226 aaKnown RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 OVGP1Q12889 678 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 SMAD4Q13485 552 aaKnown RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 GKAP1Q5VSY0 366 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 Q6ZVL8 140 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 NXPE1Q8N323 547 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 ZNF513Q8N8E2 541 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 OR6Y1Q8NGX8 325 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 LKAAEAR1Q8TD35 194 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 SCAMP4Q969E2 229 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 MOCOSQ96EN8 888 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 GPR21Q99679 349 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 KCNK12Q9HB15 430 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 POPDC3Q9HBV1 291 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 LIMD1Q9UGP4 676 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 VPS9D1Q9Y2B5 631 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 OAS3Q9Y6K5 1087 aaKnown RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 H3BMM5 538 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 ITM2AO43736 263 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 PSMD8P48556 350 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 PTPN5P54829 565 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 OCRLQ01968 901 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 TSNAXIP1Q2TAA8 658 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 C2orf27AQ580R0 203 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 PAQR3Q6TCH7 311 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 ZYG11AQ6WRX3 759 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 NAPRTQ6XQN6 538 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 LIPIQ6XZB0 460 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 CERS6Q6ZMG9 384 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 Q7L0L9 218 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 SIDT2Q8NBJ9 832 aaKnown RBP17.45■□□□□ 0.38
PHGDH-232ENST00000641947 PTERQ96BW5 349 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 ACSS2Q9NR19 701 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 HEBP1Q9NRV9 189 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 CRLS1Q9UJA2 301 aa17.45■□□□□ 0.38
PHGDH-232ENST00000641947 IKZF3Q9UKT9 509 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms