RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PLIN3O60664 434 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 MAGEC1O60732 1142 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 PEX11AO75192 247 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 SNUPNO95149 360 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 KAT7O95251 611 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 PRAMEF1O95521 474 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 PROCP04070 461 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 APOA4P06727 396 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 SLC35E2BP0CK96 405 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 MYL2P10916 166 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 CPA3P15088 417 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 ITGALP20701 1170 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 TARSP26639 723 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 HMGCLP35914 325 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 LTBRP36941 435 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 PPARGP37231 505 aaPredicted RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 SPAM1P38567 509 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 OPRD1P41143 372 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 TTPAP49638 278 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 KPNA2P52292 529 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 RAP1GDS1P52306 607 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 PRKAA2P54646 552 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 MESP2Q0VG99 397 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 BST1Q10588 318 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 PEX6Q13608 980 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 CSHL1Q14406 222 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 ZNF234Q14588 700 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 EIF4HQ15056 248 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 SKIV2LQ15477 1246 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 CHI3L2Q15782 390 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 DNAL1Q4LDG9 190 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 LRRC66Q68CR7 880 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 LRRC8EQ6NSJ5 796 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 KLC3Q6P597 504 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 BRAT1Q6PJG6 821 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 CRTC1Q6UUV9 634 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 GALNT7Q86SF2 657 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 TTC7BQ86TV6 843 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 MTDHQ86UE4 582 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 CRLF3Q8IUI8 442 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 SFTPA1Q8IWL2 248 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.81□□□□□ -1
PHGDH-219ENST00000641513 FAM13CQ8NE31 585 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 GIMAP7Q8NHV1 300 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 RFWD2Q8NHY2 731 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 OR8D1Q8WZ84 308 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 FAM136AQ96C01 138 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 NXNL1Q96CM4 212 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 ECHDC3Q96DC8 303 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 THOC1Q96FV9 657 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 TCF12Q99081 682 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 MYCBPQ99417 103 aaPredicted RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 TTC1Q99614 292 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 OLFM1Q99784 485 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 UNKQ9C0B0 810 aaKnown RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 TTYH1Q9H313 450 aaPredicted RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 ASB8Q9H765 288 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 NMRAL1Q9HBL8 299 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 GPAMQ9HCL2 828 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 ZDHHC4Q9NPG8 344 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 HEY2Q9UBP5 337 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 B4GALT6Q9UBX8 382 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 CRLS1Q9UJA2 301 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 HAO1Q9UJM8 370 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 APPL1Q9UKG1 709 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 EMCNQ9ULC0 261 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 CORO1CQ9ULV4 474 aaPredicted RBP8.81□□□□□ -1
PHGDH-219ENST00000641513 NUMBLQ9Y6R0 609 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 WASF2Q9Y6W5 498 aa8.81□□□□□ -1
PHGDH-219ENST00000641513 REV3LO60673 3130 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 A0A0G2JND7 137 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 GLYATL1P3A0A0U1RQE8 302 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 UPK3BL1B0FP48 263 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 UPK3BL2E5RIL1 263 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 FCHO1O14526 889 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 ANP32DO95626 131 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 PRNPP04156 253 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 SERPINA6P08185 405 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CCDC166P0CW27 439 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CHRM1P11229 460 aaPredicted RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 COL6A2P12110 1019 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 BPIP17213 487 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 GNAZP19086 355 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 AOC1P19801 751 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 VIPR1P32241 457 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 WASP42768 502 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 SOX9P48436 509 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 CDKN2DP55273 166 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 SEC13P55735 322 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 ZBTB16Q05516 673 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 STX3Q13277 289 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 ADGRE1Q14246 886 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CHRNA6Q15825 494 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CCDC85BQ15834 202 aaPredicted RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 FAM83EQ2M2I3 478 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 TYSND1Q2T9J0 566 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 TSNAXIP1Q2TAA8 658 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 ZNF805Q5CZA5 627 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms