RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ECT2Q9H8V3 914 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 IL26Q9NPH9 171 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 SAR1AQ9NR31 198 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 DEC1Q9P2X7 70 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 PLA2G4CQ9UP65 541 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 RAP2CQ9Y3L5 183 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 OAS3Q9Y6K5 1087 aaKnown RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 CAPN7Q9Y6W3 813 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 KIF26AQ9ULI4 1882 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 TTC34A8MYJ7 566 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 PRMT5O14744 637 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 OR1I1O60431 355 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 UNC5CO95185 931 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ARSAP15289 507 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ZNF7P17097 686 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 IRX1P78414 480 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 CFAP157Q5JU67 520 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 LRRC66Q68CR7 880 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ANKRD54Q6NXT1 300 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ATG14Q6ZNE5 492 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 TSPAN33Q86UF1 283 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 C12orf40Q86WS4 652 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 NKAPQ8N5F7 415 aaKnown RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 SGF29Q96ES7 293 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ZFYVE19Q96K21 471 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 DERL2Q9GZP9 239 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 TFB2MQ9H5Q4 396 aaKnown RBP16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ALG9Q9H6U8 611 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ZFP14Q9HCL3 533 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 PNPOQ9NVS9 261 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 DNAJC28Q9NX36 388 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 ELOVL2Q9NXB9 296 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 CDH7Q9ULB5 785 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 MED16Q9Y2X0 877 aa16.34■□□□□ 0.21
PHGDH-216ENST00000641375 TRBV5-4A0A0C4DH59 114 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 E5RI56 91 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 H0YHG0 523 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 GAPDHSO14556 408 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-216ENST00000641375 ATP6V0D1P61421 351 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 PRKAA1Q13131 559 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 CTSL3PQ5NE16 218 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 PAQR3Q6TCH7 311 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 RBFAQ8N0V3 343 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 ZNF781Q8N8C0 355 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 MYLIPQ8WY64 445 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 CNDP1Q96KN2 507 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 RILPQ96NA2 401 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 GPR21Q99679 349 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 TUBB6Q9BUF5 446 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 CDH19Q9H159 772 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 P2RY12Q9H244 342 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 IL36AQ9UHA7 158 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 TRMT6Q9UJA5 497 aaKnown RBP16.33■□□□□ 0.2
PHGDH-216ENST00000641375 WASF2Q9Y6W5 498 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 A8MX80 341 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 RFXAPO00287 272 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 ZBTB14O43829 449 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 CCDC22O60826 627 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 LEFTY1O75610 366 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 CYP2A6P11509 494 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-216ENST00000641375 BMP1P13497 986 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 ZNF30P17039 623 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 RPS3P23396 243 aaKnown RBP eCLIP16.33■□□□□ 0.23e-8■■■■■ 28.4
PHGDH-216ENST00000641375 FCARP24071 287 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 PTSQ03393 145 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 HYAL1Q12794 435 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 EIF4HQ15056 248 aaKnown RBP16.33■□□□□ 0.2
PHGDH-216ENST00000641375 HSF5Q4G112 596 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-216ENST00000641375 TRIM67Q6ZTA4 783 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 SERPINA9Q86WD7 417 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 HCAR2Q8TDS4 363 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 PBXIP1Q96AQ6 731 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 FAM136AQ96C01 138 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 ABHD8Q96I13 439 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 CLPBQ9H078 707 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 HAO1Q9UJM8 370 aa16.33■□□□□ 0.2
PHGDH-216ENST00000641375 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-216ENST00000641375 A8MT66 165 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 SLCO1B7G3V0H7 640 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 SMIM24O75264 130 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 TPBGLP0DKB5 382 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 CHRM3P20309 590 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 SP100P23497 879 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-216ENST00000641375 ACRV1P26436 265 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 RASSF2P50749 326 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 RPL14P50914 215 aaKnown RBP16.32■□□□□ 0.2
PHGDH-216ENST00000641375 NCALDP61601 193 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 NFKB2Q00653 900 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 SETMARQ53H47 684 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-216ENST00000641375 ARL13AQ5H913 290 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-216ENST00000641375 SYCE2Q6PIF2 218 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 CCNYL1Q8N7R7 359 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 KDM1BQ8NB78 822 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 PTERQ96BW5 349 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 PLEKHG4BQ96PX9 1271 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 CRLS1Q9UJA2 301 aa16.32■□□□□ 0.2
PHGDH-216ENST00000641375 APOBEC2Q9Y235 224 aaKnown RBP16.32■□□□□ 0.2
PHGDH-216ENST00000641375 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
PHGDH-216ENST00000641375 H3BMM5 538 aa16.31■□□□□ 0.2
PHGDH-216ENST00000641375 HNRNPCL1O60812 293 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms