RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 KLHL35Q6PF15 583 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 TTC33Q6PID6 262 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-215ENST00000639145 ARCQ7LC44 396 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 C14orf80Q86SX3 495 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 FAIM2Q9BWQ8 316 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 ATAD3AQ9NVI7 634 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 CORO7P57737 925 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 SLC25A3Q00325 362 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 KLC1Q07866 573 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 CSTF3Q12996 717 aaKnown RBP13.55□□□□□ -0.24
SCARB2-215ENST00000639145 ALFQ53S48 1182 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 TXNDC11Q6PKC3 985 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 GCNT7Q6ZNI0 430 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 PAGE2Q7Z2X7 111 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 GTF2A1LQ9UNN4 478 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 KNTC1P50748 2209 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 MBLAC1A4D2B0 266 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-215ENST00000639145 TM7SF2O76062 418 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 ITGBL1O95965 494 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-215ENST00000639145 LIMK2P53671 638 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 OLIG2Q13516 323 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 FAM98BQ52LJ0 330 aaKnown RBP13.55□□□□□ -0.24
SCARB2-215ENST00000639145 MSANTD2Q6P1R3 559 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 GDPD4Q6W3E5 623 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 CUZD1Q86UP6 607 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
SCARB2-215ENST00000639145 OR10H1Q9Y4A9 318 aa13.55□□□□□ -0.24
SCARB2-215ENST00000639145 TK2O00142 265 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 MPSTP25325 297 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 VHLP40337 213 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 KIAA0408Q6ZU52 694 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 GPRIN1Q7Z2K8 1008 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 BTBD10Q9BSF8 475 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 RSPH9Q9H1X1 276 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 BPGMP07738 259 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ACTR1BP42025 376 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 TRPC1P48995 793 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ACTR1AP61163 376 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 RGS1Q08116 209 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 TSNQ15631 228 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ANO7Q6IWH7 933 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 LYSMD3Q7Z3D4 306 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 MICU2Q8IYU8 434 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 FBXO30Q8TB52 745 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 IRF7Q92985 503 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 KXD1Q9BQD3 176 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ELAC1Q9H777 363 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SLC17A6Q9P2U8 582 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 TCRBV7S3A2A0A539 114 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 URADA6NGE7 173 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ZBTB22O15209 634 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SLC7A4O43246 635 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 IPO13O94829 963 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 TRMT5Q32P41 509 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 TIGD2Q4W5G0 525 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 UBXN11Q5T124 520 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 DRICH1Q6PGQ1 229 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 STK32CQ86UX6 486 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 GPR180Q86V85 440 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 UNC5BQ8IZJ1 945 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 LCN9Q8WX39 176 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 TSC22D3Q99576 134 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 CCT7Q99832 543 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 DNAJC11Q9NVH1 559 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 MYH6P13533 1939 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 A0A0D9SEW6 157 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 FASP25445 335 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 POLD2P49005 469 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SAMD4BQ5PRF9 694 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ZCCHC8Q6NZY4 707 aaKnown RBP13.54□□□□□ -0.24
SCARB2-215ENST00000639145 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 STARD8Q92502 1023 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 DCLRE1BQ9H816 532 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 SGK2Q9HBY8 427 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 FBXL12Q9NXK8 326 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 PLLPQ9Y342 182 aa13.54□□□□□ -0.24
SCARB2-215ENST00000639145 FPGTO14772 594 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 WNT9AO14904 365 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CFIP05156 583 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CDH3P22223 829 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 FECHP22830 423 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 GKP32189 559 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 BLVRAP53004 296 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 NRG1Q02297 640 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 RFTN1Q14699 578 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms