RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 PPIEQ9UNP9 301 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 ZFR2Q9UPR6 939 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 SLC9A8Q9Y2E8 581 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 PPIL1Q9Y3C6 166 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 MAB21L2Q9Y586 359 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 AP4B1Q9Y6B7 739 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 KCNE2Q9Y6J6 123 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 KIF27Q86VH2 1401 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ADGRF5Q8IZF2 1346 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 A0A087WZ62 844 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 A0A087WZY1 265 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 C2orf92A0A1B0GVN3 265 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TMEM210A6NLX4 147 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PSMD11O00231 422 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PLK4O00444 970 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PRRG1O14668 218 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 WNT9AO14904 365 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PCDH17O14917 1159 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SMAD9O15198 467 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 ALOX15BO15296 676 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 BCAT2O15382 392 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 AKR7A2O43488 359 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 DNPH1O43598 174 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TLX2O43763 284 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 IDH3BO43837 385 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MSCO60682 206 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 GUCY1B2O75343 617 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TRIM3O75382 744 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 SCGB2A1O75556 95 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RPP40O75818 363 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 CLPXO76031 633 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SLCO2B1O94956 709 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RASAL1O95294 804 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TGM6O95932 706 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 CH25HO95992 272 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SERPINA3P01011 423 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 LPLP06858 475 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 YES1P07947 543 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 CPA1P15085 419 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ZNF28P17035 718 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 HOXB8P17481 243 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 POLR2EP19388 210 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 CD247P20963 164 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 LMO1P25800 156 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PTX3P26022 381 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 CDC25AP30304 524 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MAT2AP31153 395 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 MC5RP33032 325 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 WASP42768 502 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MCAMP43121 646 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 LEPRP48357 1165 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 CARSP49589 748 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 ANXA11P50995 505 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 ADCY7P51828 1080 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 THOP1P52888 689 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SUCLG1P53597 346 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 CRYBB1P53674 252 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 INHBCP55103 352 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 STX17P56962 302 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 S100A12P80511 92 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 DGCR2P98153 550 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ATP2C1P98194 919 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 IRF9Q00978 393 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 POU4F1Q01851 419 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 DRP2Q13474 957 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ZNF273Q14593 569 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 NOLC1Q14978 699 aaKnown RBP eCLIP3.01□□□□□ -1.93
VIM-210ENST00000637053 SGCBQ16585 318 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MTHFSDQ2M296 383 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 KLHL40Q2TBA0 621 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TMEM119Q4V9L6 283 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PABPC1LQ4VXU2 614 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 TTMPQ5BVD1 217 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PITRM1Q5JRX3 1037 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PLAC9Q5JTB6 97 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PIP5KL1Q5T9C9 394 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ZNF658Q5TYW1 1059 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 STRIP1Q5VSL9 837 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 KCTD11Q693B1 232 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RAET1GQ6H3X3 334 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 FSTL4Q6MZW2 842 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 DPY19L2P1Q6NXN4 242 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PMF1Q6P1K2 205 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RNF207Q6ZRF8 634 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MTSS1LQ765P7 747 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SYT13Q7L8C5 426 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 LRRC70Q7Z2Q7 622 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TRAPPC11Q7Z392 1133 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 HAUS6Q7Z4H7 955 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 HEATR3Q7Z4Q2 680 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ARHGAP22Q7Z5H3 698 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ADCK2Q7Z695 626 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RASAL3Q86YV0 1011 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PPIL6Q8IXY8 311 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 FAM185AQ8N0U4 392 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 LZTR1Q8N653 840 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 VGLL2Q8N8G2 317 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PI4KAP1Q8N8J0 262 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 NHLRC2Q8NBF2 726 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ICA1LQ8NDH6 482 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms