RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CLN3Q13286 438 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 LLGL1Q15334 1064 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ATP13A4Q4VNC1 1196 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 DENND2CQ68D51 928 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CCDC81Q6ZN84 652 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 RD3Q7Z3Z2 195 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 HOOK3Q86VS8 718 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 FBXO39Q8N4B4 442 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TMEM74Q96NL1 305 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 RBM15Q96T37 977 aaKnown RBP eCLIP12.62□□□□□ -0.391e-8■□□□□ 10.8
CTSD-208ENST00000636843 ATP13A3Q9H7F0 1226 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 PDFQ9HBH1 243 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 NEU2Q9Y3R4 380 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 OR1A2Q9Y585 309 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 DGKBQ9Y6T7 804 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ATMQ13315 3056 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 LRRD1A4D1F6 860 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 J3KR12 359 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CASC3O15234 703 aaKnown RBP12.62□□□□□ -0.39
CTSD-208ENST00000636843 LIASO43766 372 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 SHOX2O60902 331 aaPredicted RBP12.62□□□□□ -0.39
CTSD-208ENST00000636843 PCCBP05166 539 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 HOXC4P09017 264 aaPredicted RBP12.62□□□□□ -0.39
CTSD-208ENST00000636843 UGT1A5P35504 534 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 INHBCP55103 352 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 IFFO1Q0D2I5 559 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TAZQ16635 292 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 KIF26BQ2KJY2 2108 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 KAZNQ674X7 775 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 TRMT10CQ7L0Y3 403 aaKnown RBP12.62□□□□□ -0.39
CTSD-208ENST00000636843 RAB11FIP2Q7L804 512 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 SRLQ86TD4 932 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CAMK1DQ8IU85 385 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 GPR156Q8NFN8 814 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 RAPGEF5Q92565 580 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 CCNL2Q96S94 520 aaPredicted RBP12.62□□□□□ -0.39
CTSD-208ENST00000636843 FOXP3Q9BZS1 431 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ACSL6Q9UKU0 697 aa12.62□□□□□ -0.39
CTSD-208ENST00000636843 ATXN7L1Q9ULK2 861 aaPredicted RBP12.62□□□□□ -0.39
CTSD-208ENST00000636843 A0A1W2PQM1 296 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 C3orf70A6NLC5 250 aaPredicted RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 CACNB4O00305 520 aaPredicted RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 TNFRSF10CO14798 259 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 KRT10P13645 584 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 PNLIPP16233 465 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 KELP23276 732 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 KDELR1P24390 212 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 IVDP26440 423 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 SERPINA4P29622 427 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 SLC5A2P31639 672 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 CCKBRP32239 447 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 ADCY8P40145 1251 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 PAPOLAP51003 745 aaKnown RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 POLR2LP62875 67 aaKnown RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 NSUN2Q08J23 767 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTSD-208ENST00000636843 LY6DQ14210 128 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 RFTN1Q14699 578 aaPredicted RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 OGFOD3Q6PK18 319 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 B3GNT8Q7Z7M8 397 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 ARFGAP1Q8N6T3 406 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 OR56A4Q8NGH8 313 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 ECHDC3Q96DC8 303 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 MED8Q96G25 268 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 PDXPQ96GD0 296 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 CELF6Q96J87 481 aaKnown RBP12.61□□□□□ -0.39
CTSD-208ENST00000636843 SEMA4CQ9C0C4 833 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 SLC39A8Q9C0K1 460 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 APPL1Q9UKG1 709 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
CTSD-208ENST00000636843 AHCTF1Q8WYP5 2266 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 B8ZZF3 427 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 EEF2KO00418 725 aaKnown RBP12.6□□□□□ -0.39
CTSD-208ENST00000636843 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
CTSD-208ENST00000636843 GLB1P16278 677 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 NR1D1P20393 614 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 ITGA8P53708 1063 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 BCL2L1Q07817 233 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 TCEA2Q15560 299 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 ERMARDQ5T6L9 678 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 TXNRD3NBQ6F5E7 133 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 LIPIQ6XZB0 460 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 BBS12Q6ZW61 710 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 GSTA5Q7RTV2 222 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 TAF8Q7Z7C8 310 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 ZSWIM9Q86XI8 627 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 CCNJLQ8IV13 435 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 OR1E3Q8WZA6 343 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 TMEM159Q96B96 161 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 TMEM109Q9BVC6 243 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 CINPQ9BW66 212 aaPredicted RBP12.6□□□□□ -0.39
CTSD-208ENST00000636843 CAPS2Q9BXY5 557 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms