RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 HSPA1AP0DMV8 641 aaKnown RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 HSPA1BP0DMV9 641 aaKnown RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 UBL4AP11441 157 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 MYOD1P15172 320 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 CDH2P19022 906 aaPredicted RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 MARK3P27448 753 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 CORO1AP31146 461 aaKnown RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 UBA7P41226 1012 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 AMPHP49418 695 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 BRWD1-AS2P59051 145 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 OLR1P78380 273 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 PLIN5Q00G26 463 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 CSTF3Q12996 717 aaKnown RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 INTS11Q5TA45 600 aaKnown RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 SLC9C2Q5TAH2 1124 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 PLA2G4FQ68DD2 849 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 SLC27A1Q6PCB7 646 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 KCTD8Q6ZWB6 473 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 DSG4Q86SJ6 1040 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 SLC9B2Q86UD5 537 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 HAPLN4Q86UW8 402 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 RNF168Q8IYW5 571 aaPredicted RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 BBS10Q8TAM1 723 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 APBB2Q92870 758 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 ABHD8Q96I13 439 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 ZNF583Q96ND8 569 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 SEPT5Q99719 369 aaPredicted RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 LBHD1Q9BQE6 289 aaPredicted RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 GLIS2Q9BZE0 524 aaPredicted RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 BARHL1Q9BZE3 327 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 TKTL2Q9H0I9 626 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 SLC25A18Q9H1K4 315 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 MYH16Q9H6N6 1097 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 CWC15Q9P013 229 aaKnown RBP3.2□□□□□ -1.9
SRP54-214ENST00000630962 TAAR2Q9P1P5 351 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 OR14J1Q9UGF5 321 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 CRYL1Q9Y2S2 319 aa3.2□□□□□ -1.9
SRP54-214ENST00000630962 IGLV5-45A0A087WSX0 123 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 A0A1W2PPH5 198 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 M0QZ24 198 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 PAGE4O60829 102 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 SEC31AO94979 1220 aaKnown RBP3.19□□□□□ -1.9
SRP54-214ENST00000630962 IGHV4-39P01824 125 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 UGT1A1P22309 533 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 AHRP35869 848 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 NR2C2P49116 596 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 VEGFCP49767 419 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 MRPS34P82930 218 aaKnown RBP3.19□□□□□ -1.9
SRP54-214ENST00000630962 PDE1CQ14123 709 aaPredicted RBP3.19□□□□□ -1.9
SRP54-214ENST00000630962 SOWAHCQ53LP3 525 aaPredicted RBP3.19□□□□□ -1.9
SRP54-214ENST00000630962 C18orf63Q68DL7 685 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 SLC35E4Q6ICL7 350 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 PAPD4Q6PIY7 484 aaKnown RBP3.19□□□□□ -1.9
SRP54-214ENST00000630962 ZNF852Q6ZMS4 543 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 BEST3Q8N1M1 668 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 TMTC2Q8N394 836 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 NAXEQ8NCW5 288 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 IL17REQ8NFR9 667 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 RFFLQ8WZ73 363 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 POMGNT1Q8WZA1 660 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 ARHGEF26Q96DR7 871 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 PGLYRP2Q96PD5 576 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 SEC62Q99442 399 aaKnown RBP3.19□□□□□ -1.9
SRP54-214ENST00000630962 SMC4Q9NTJ3 1288 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 TCP11L1Q9NUJ3 509 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 HCFC1R1Q9NWW0 138 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 STK39Q9UEW8 545 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 GAB2Q9UQC2 676 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 KLHL20Q9Y2M5 609 aa3.19□□□□□ -1.9
SRP54-214ENST00000630962 ZCWPW2A0A1B0GU75 182 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 A6NLC8 198 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ERVV-2B6SEH9 535 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 SCAMP1O15126 338 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 SPARCP09486 303 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ACTN1P12814 892 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ITGA2P17301 1181 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 KRT9P35527 623 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 HSD17B4P51659 736 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 CLCN3P51790 818 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 HILS1P60008 231 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ACVR2BQ13705 512 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 NAB2Q15742 525 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 PNLIPRP3Q17RR3 467 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 COL28A1Q2UY09 1125 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ALFQ53S48 1182 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 SIRPB2Q5JXA9 342 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ZNF449Q6P9G9 518 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 MARK2Q7KZI7 788 aaKnown RBP3.18□□□□□ -1.9
SRP54-214ENST00000630962 MAP7D3Q8IWC1 876 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 OR2AK2Q8NG84 335 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 METTL6Q8TCB7 284 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 DUSP19Q8WTR2 217 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 IGSF8Q969P0 613 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 ZUFSPQ96AP4 578 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 INTS12Q96CB8 462 aaKnown RBP3.18□□□□□ -1.9
SRP54-214ENST00000630962 WBP1Q96G27 269 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 NCAPGQ9BPX3 1015 aa3.18□□□□□ -1.9
SRP54-214ENST00000630962 POLR3CQ9BUI4 534 aaPredicted RBP3.18□□□□□ -1.9
SRP54-214ENST00000630962 RBM4Q9BWF3 364 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms