RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	CES5A	Q6NT32	575 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	RINL	Q6ZS11	566 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	PGBD5	Q8N414	524 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	PCYOX1L	Q8NBM8	494 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	RBM15B	Q8NDT2	890 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	PANX3	Q96QZ0	392 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	KLF16	Q9BXK1	252 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	OXSM	Q9NWU1	459 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	KL	Q9UEF7	1012 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	DRGX	A6NNA5	263 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	POP4	O95707	220 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	COX4I1	P13073	169 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	HMGA1	P17096	107 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SPAM1	P38567	509 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	VIPR2	P41587	438 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	CDKN1C	P49918	316 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	TRIP10	Q15642	601 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	RAET1G	Q6H3X3	334 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	GRAMD4	Q6IC98	578 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SDE2	Q6IQ49	451 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SLC46A2	Q9BY10	475 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	MTG2	Q9H4K7	406 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SIRPG	Q9P1W8	387 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	ESRRB	O95718	433 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	MSLN	Q13421	630 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	PTK2B	Q14289	1009 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	ACAP2	Q15057	778 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	ARSI	Q5FYB1	569 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SZRD1	Q7Z422	152 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	INPP5D	Q92835	1189 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	SUV39H2	Q9H5I1	410 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	OPTC	Q9UBM4	332 aa		13.23	□□□□□ -0.29
NRXN1-233	ENST00000630543	CDC7	O00311	574 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	IGLV3-25	P01717	112 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	CYTH1	Q15438	398 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	TMTC4	Q5T4D3	741 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	KCTD11	Q693B1	232 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	GAREM2	Q75VX8	874 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	RCN3	Q96D15	328 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	SIKE1	Q9BRV8	207 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	EFHD1	Q9BUP0	239 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	STK39	Q9UEW8	545 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543		A0A0G2JMZ2	1700 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	RNASEH1	O60930	286 aa	Known RBP	13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	HLA-E	P13747	358 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	CCNF	P41002	786 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	MAGEA3	P43357	314 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	PHEX	P78562	749 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	SULT2A1	Q06520	285 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	CHRNA6	Q15825	494 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	LSM12	Q3MHD2	195 aa	Known RBP	13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	KNL1	Q8NG31	2342 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	OR52B2	Q96RD2	323 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	TDRD1	Q9BXT4	1180 aa	Known RBP	13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	PSMD12	O00232	456 aa	Predicted RBP	13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	EPHX1	P07099	455 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	HGF	P14210	728 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	CREB5	Q02930	508 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	TNFAIP8L3	Q5GJ75	292 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	CGB2	Q6NT52	195 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	METTL3	Q86U44	580 aa	Known RBP	13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	SYTL1	Q8IYJ3	562 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	ICA1L	Q8NDH6	482 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	ARRDC2	Q8TBH0	407 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	ZDHHC2	Q9UIJ5	367 aa		13.22	□□□□□ -0.29
NRXN1-233	ENST00000630543	LCHN	A4D1U4	455 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543		A8MT66	165 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	AZIN1	O14977	448 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CXCL10	P02778	98 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	DLD	P09622	509 aa	Known RBP	13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	PIK3R1	P27986	724 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	SKIV2L2	P42285	1042 aa	Known RBP	13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CTSO	P43234	321 aa	Predicted RBP	13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	ETV4	P43268	484 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CDKN2D	P55273	166 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	ATP6V0D1	P61421	351 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	FAM13C	Q8NE31	585 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	ELOVL6	Q9H5J4	265 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	LZTS1	Q9Y250	596 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	GNGT2	O14610	69 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	STC1	P52823	247 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CAPRIN1	Q14444	709 aa	Known RBP	13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CARD16	Q5EG05	197 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	PSAPL1	Q6NUJ1	521 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	DPY19L3	Q6ZPD9	716 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	PYDC1	Q8WXC3	89 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	IRF7	Q92985	503 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	NPAS2	Q99743	824 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	HEPH	Q9BQS7	1158 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	TTLL2	Q9BWV7	592 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	EIF2B4	Q9UI10	523 aa	Known RBP	13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	CCL26	Q9Y258	94 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	RWDD3	Q9Y3V2	267 aa		13.21	□□□□□ -0.29
NRXN1-233	ENST00000630543	FGF19	O95750	216 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms