RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TIPRLO75663 272 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 PKMP14618 531 aaKnown RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 ITGB8P26012 769 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 MAGEA3P43357 314 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CLCN5P51795 746 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 RPL38P63173 70 aaKnown RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 GRB7Q14451 532 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 OR4D1Q15615 310 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 TRIM71Q2Q1W2 868 aaKnown RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 KCTD11Q693B1 232 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CRTC3Q6UUV7 619 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 GPR156Q8NFN8 814 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 OR52B6Q8NGF0 335 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CYGBQ8WWM9 190 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 RNF31Q96EP0 1072 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 PRICKLE1Q96MT3 831 aaPredicted RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 TSSK3Q96PN8 268 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 TMEM248Q9NWD8 314 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 POMPQ9Y244 141 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 U3KQV3 271 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 BRCA1P38398 1863 aaKnown RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 PRAMEF11O60813 436 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 SEC22BO75396 215 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 S1PR4O95977 384 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 GLUD1P00367 558 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 GBAP04062 536 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 APOA4P06727 396 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CLTBP09497 229 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 HIST1H2AGP0C0S8 130 aaPredicted RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 MTHFD1P11586 935 aaKnown RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 HLA-DPA1P20036 260 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 HIST1H2ADP20671 130 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 PPARGP37231 505 aaPredicted RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 CCNG1P51959 295 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 DGKQP52824 942 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CDH4P55283 916 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 PRKG2Q13237 762 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 SF1Q15637 639 aaKnown RBP7.47□□□□□ -1.21
PKP4-217ENST00000628904 CHRNA6Q15825 494 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 SYTL3Q4VX76 610 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 RNF220Q5VTB9 566 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 UGT3A1Q6NUS8 523 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 C11orf74Q86VG3 221 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 ADGRG2Q8IZP9 1017 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 PARP8Q8N3A8 854 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 OR6Y1Q8NGX8 325 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 STAG3L4Q8TBR4 150 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 TWIST2Q8WVJ9 160 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 BADQ92934 168 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 MYO19Q96H55 970 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 HIST1H2AHQ96KK5 128 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CNDP1Q96KN2 507 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 TMEM74Q96NL1 305 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 HIST1H2AJQ99878 128 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 FEM1AQ9BSK4 669 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 H2AFJQ9BTM1 129 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 VCXQ9H320 206 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 CAAP1Q9H8G2 361 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 VPS45Q9NRW7 570 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 PSMD13Q9UNM6 376 aa7.47□□□□□ -1.21
PKP4-217ENST00000628904 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 A0A1B0GTL3 188 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 CCDC189A1A4V9 331 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 LCHNA4D1U4 455 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 TRPC5OSA6NMA1 111 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ECI2O75521 394 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ALDH1A2O94788 518 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ITGAXP20702 1163 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 KCNK10P57789 538 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ST8SIA6P61647 398 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ZIK1Q3SY52 487 aaPredicted RBP7.46□□□□□ -1.21
PKP4-217ENST00000628904 MTX3Q5HYI7 312 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 LY6G5CQ5SRR4 150 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 KIAA0930Q6ICG6 404 aaPredicted RBP7.46□□□□□ -1.21
PKP4-217ENST00000628904 CCSAPQ6IQ19 270 aaPredicted RBP7.46□□□□□ -1.21
PKP4-217ENST00000628904 ASRGL1Q7L266 308 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 GET4Q7L5D6 327 aaPredicted RBP7.46□□□□□ -1.21
PKP4-217ENST00000628904 FAM124AQ86V42 546 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 SPPL2CQ8IUH8 684 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 TRAPPC5Q8IUR0 188 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 MYO1HQ8N1T3 1032 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 UMODL1-AS1Q8N2C9 162 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 RNF175Q8N4F7 328 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ARRDC2Q8TBH0 407 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 C19orf60Q96EN9 201 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 VPS50Q96JG6 964 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 MYCBPQ99417 103 aaPredicted RBP7.46□□□□□ -1.21
PKP4-217ENST00000628904 CIB1Q99828 191 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 EBF3Q9H4W6 596 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 SYTL2Q9HCH5 934 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 CLIC5Q9NZA1 410 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 ITM2BQ9Y287 266 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 TDRKHQ9Y2W6 561 aaKnown RBP7.46□□□□□ -1.21
PKP4-217ENST00000628904 HCFC2Q9Y5Z7 792 aa7.46□□□□□ -1.21
PKP4-217ENST00000628904 TRAV19A0A0A6YYK7 116 aa7.46□□□□□ -1.22
PKP4-217ENST00000628904 A0A0J9YYE9 177 aa7.46□□□□□ -1.22
PKP4-217ENST00000628904 F8W8V4 182 aa7.46□□□□□ -1.22
PKP4-217ENST00000628904 AZIN1O14977 448 aa7.46□□□□□ -1.22
PKP4-217ENST00000628904 LDB2O43679 373 aa7.46□□□□□ -1.22
PKP4-217ENST00000628904 LZTS3O60299 673 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms