RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 IL9RQ01113 521 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CARD16Q5EG05 197 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 RBM20Q5T481 1227 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 HHATQ5VTY9 493 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CES4AQ5XG92 561 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 LYSMD3Q7Z3D4 306 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 GALNT7Q86SF2 657 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CLEC14AQ86T13 490 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CEP97Q8IW35 865 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PLPP6Q8IY26 295 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 NDUFAF2Q8N183 169 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PLD6Q8N2A8 252 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 RPLP0P6Q8NHW5 317 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 FAM111AQ96PZ2 611 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC13A1Q9BZW2 595 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 MAGEE1Q9HCI5 957 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 FBXO6Q9NRD1 293 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF358Q9NW07 568 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 IL17CQ9P0M4 197 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PLLPQ9Y342 182 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF711Q9Y462 761 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 WASF2Q9Y6W5 498 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PIKFYVEQ9Y2I7 2098 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CKAP5Q14008 2032 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ATG2BQ96BY7 2078 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 GMNCA6NCL1 334 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 KHNYNO15037 678 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 GPR39O43194 453 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC4A1P02730 911 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 SRPRAP08240 638 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 DLDP09622 509 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC35E2BP0CK96 405 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 TAC1P20366 129 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 DRD4P21917 467 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CA5AP35218 305 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CD151P48509 253 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CDKN1CP49918 316 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 DGKEP52429 567 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ST8SIA6P61647 398 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 MRPS21P82921 87 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 XIAPP98170 497 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 IRF9Q00978 393 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 TIAL1Q01085 375 aaKnown RBP eCLIP9.47□□□□□ -0.894e-8■■■■□ 22.5
PDLIM5-223ENST00000627587 CREB5Q02930 508 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PEX6Q13608 980 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ZKSCAN8Q15776 578 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 HSF5Q4G112 596 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 GRAMD4Q6IC98 578 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 MRNIPQ6NTE8 343 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 TSTD1Q8NFU3 115 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 GPR150Q8NGU9 434 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CABS1Q96KC9 395 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CCT8L2Q96SF2 557 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 SUV39H2Q9H5I1 410 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 ZDHHC6Q9H6R6 413 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 FBRSL1Q9HCM7 1045 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PPIL1Q9Y3C6 166 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 A0A1W2PQ67 120 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 CAPN8A6NHC0 703 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 NPIPB15A6NHN6 443 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 H7C0S8 307 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 STX7O15400 261 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 WISP3O95389 354 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM107AO95990 144 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 C2P06681 752 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 CSRP1P21291 193 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 LHCGRP22888 699 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 HNF1BP35680 557 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 HMGCLP35914 325 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 POLD2P49005 469 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 SEMG2Q02383 582 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 KDSRQ06136 332 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 ILF2Q12905 390 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF460Q14592 562 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 EIF4HQ15056 248 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 CCDC6Q16204 474 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 PDK4Q16654 411 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 TYSND1Q2T9J0 566 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 CGB2Q6NT52 195 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF549Q6P9A3 640 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 FOXR1Q6PIV2 292 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 AFTPHQ6ULP2 937 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 TSPAN33Q86UF1 283 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 SLC41A1Q8IVJ1 513 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 PIANPQ8IYJ0 282 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 LRRC34Q8IZ02 419 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 TMEM151AQ8N4L1 468 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 OR4L1Q8NH43 312 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 BCAS4Q8TDM0 211 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 MARVELD3Q96A59 401 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 CHMP6Q96FZ7 201 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 MAGEB18Q96M61 343 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF641Q96N77 438 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 HHIPQ96QV1 700 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 MCCC1Q96RQ3 725 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 LYSMD1Q96S90 227 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 OLFM1Q99784 485 aa9.46□□□□□ -0.9
PDLIM5-223ENST00000627587 OMDQ99983 421 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms