RNA–Protein interactions for RNA: ENST00000627440.2

SNAP23-223, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 210 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-223	ENST00000627440	RBM4	Q9BWF3	364 aa	Known RBP	6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	CXorf56	Q9H5V9	222 aa		6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	VRTN	Q9H8Y1	702 aa		6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	CARS2	Q9HA77	564 aa	Known RBP	6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	MKL2	Q9ULH7	1088 aa		6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	DNM3	Q9UQ16	869 aa		6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	EIF3L	Q9Y262	564 aa	Known RBP	6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	MRPS2	Q9Y399	296 aa	Known RBP	6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	PTRH2	Q9Y3E5	179 aa	Known RBP	6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	DSCAM	O60469	2012 aa		6.14	□□□□□ -1.43
SNAP23-223	ENST00000627440	TRBV23OR9-2	A0A075B6M9	112 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	GOLGA6L7	A0A1B0GV03	622 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	PRSS38	A1L453	326 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440		A8MXQ7	604 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440		E7EWF7	191 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	HNRNPDL	O14979	420 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	GPR37	O15354	613 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	MMP20	O60882	483 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	CLDN9	O95484	217 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	PCCB	P05166	539 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	UQCRH	P07919	91 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	PDGFRA	P16234	1089 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	NELFE	P18615	380 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	MX1	P20591	662 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	PTGS2	P35354	604 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	LIFR	P42702	1097 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	ACOT2	P49753	483 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	NCKAP1L	P55160	1127 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	MAP3K7CL	P57077	242 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	KIAA1024L	P59773	190 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	RBP5	P82980	135 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	VLDLR	P98155	873 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	DDX10	Q13206	875 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	CACHD1	Q5VU97	1274 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	SCARA3	Q6AZY7	606 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	CYB5R2	Q6BCY4	276 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	VASN	Q6EMK4	673 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	DYM	Q7RTS9	669 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	PRSS42	Q7Z5A4	293 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	BTLA	Q7Z6A9	289 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	D2HGDH	Q8N465	521 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	CHST14	Q8NCH0	376 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	OR5M3	Q8NGP4	307 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	OR2A12	Q8NGT7	310 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	LINC01560	Q8TB33	94 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	TMEM171	Q8WVE6	324 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	ASB11	Q8WXH4	323 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	CPT1B	Q92523	772 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	RNASE6	Q93091	150 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	PRICKLE1	Q96MT3	831 aa	Predicted RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	MRPL45	Q9BRJ2	306 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	ATG10	Q9H0Y0	220 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	EML4	Q9HC35	981 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	SPTLC3	Q9NUV7	552 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	ZNF701	Q9NV72	531 aa	Predicted RBP	6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	ITGA11	Q9UKX5	1188 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	NME7	Q9Y5B8	376 aa		6.13	□□□□□ -1.43
SNAP23-223	ENST00000627440	TRIM77	I1YAP6	450 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	CCNT1	O60563	726 aa	Known RBP	6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	KLF7	O75840	302 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	CDKL5	O76039	1030 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	BEST1	O76090	585 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	FOLR1	P15328	257 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	EPHB2	P29323	1055 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	IDUA	P35475	653 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	ACTR1B	P42025	376 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	SLC11A2	P49281	568 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	ACTR1A	P61163	376 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	MTM1	Q13496	603 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	SLC12A1	Q13621	1099 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	WSCD2	Q2TBF2	565 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	PLA2G4E	Q3MJ16	856 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	RUSC1-AS1	Q66K80	236 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	LIX1L	Q8IVB5	337 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	SH2D3C	Q8N5H7	860 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	CACTIN	Q8WUQ7	758 aa	Known RBP	6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	KLHL6	Q8WZ60	621 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	ZNF514	Q96K75	400 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	LGR4	Q9BXB1	951 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	RMI1	Q9H9A7	625 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	TUFT1	Q9NNX1	390 aa		6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-223	ENST00000627440	SCAMP2	O15127	329 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	TTI1	O43156	1089 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	HIP1R	O75146	1068 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	IL18RAP	O95256	599 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	MAPT	P10636	758 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	GART	P22102	1010 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	RORA	P35398	523 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	FOXL1	Q12952	345 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	PCSK7	Q16549	785 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	PTCHD3	Q3KNS1	767 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	FAM133B	Q5BKY9	247 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	FAM166A	Q6J272	317 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	WDR59	Q6PJI9	974 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	CWC27	Q6UX04	472 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	PAQR9	Q6ZVX9	377 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	CCDC186	Q7Z3E2	898 aa		6.11	□□□□□ -1.43

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