RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 C1QTNF1Q9BXJ1 281 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 SLAMF7Q9NQ25 335 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 H0YJX3 145 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 CLDN5O00501 218 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.647e-7■■■□□ 17.3
VPS8-227ENST00000625842 HEXBP07686 556 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 ATP5F1P24539 256 aaPredicted RBP11.04□□□□□ -0.64
VPS8-227ENST00000625842 POLD2P49005 469 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 ACY1Q03154 408 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 PTSQ03393 145 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 DMPKQ09013 629 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 FRG1Q14331 258 aaKnown RBP11.04□□□□□ -0.64
VPS8-227ENST00000625842 GPRIN3Q6ZVF9 776 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 JAZF1Q86VZ6 243 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 PRSS58Q8IYP2 241 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 WDR92Q96MX6 357 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 FAM111AQ96PZ2 611 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 PAFAH2Q99487 392 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 HSD17B14Q9BPX1 270 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 KXD1Q9BQD3 176 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 PELOQ9BRX2 385 aaKnown RBP11.04□□□□□ -0.64
VPS8-227ENST00000625842 AARSD1Q9BTE6 412 aaKnown RBP11.04□□□□□ -0.64
VPS8-227ENST00000625842 KCNH6Q9H252 994 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 SGK2Q9HBY8 427 aa11.04□□□□□ -0.64
VPS8-227ENST00000625842 WDR27A2RRH5 827 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 DUXAA6NLW8 204 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 DFNA5O60443 496 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ABCB7O75027 752 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 COQ9O75208 318 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 MBTD1Q05BQ5 628 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 KLC1Q07866 573 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 RCAN2Q14206 197 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ARL14Q8N4G2 192 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 GFM1Q96RP9 751 aaKnown RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 FNDC11Q9BVV2 318 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 REEP1Q9H902 201 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 LMAN1LQ9HAT1 526 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 NGBQ9NPG2 151 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 INVSQ9Y283 1065 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 SLIT3O75094 1523 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ENPP3O14638 875 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 FFAR2O15552 330 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 RHOP08100 348 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 RARAP10276 462 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 PRG2P13727 222 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 HRH2P25021 359 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 CBX3Q13185 183 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 HNRNPDQ14103 355 aaKnown RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 PPP1R26Q5T8A7 1209 aaPredicted RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 RASSF6Q6ZTQ3 369 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 USP49Q70CQ1 688 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 IKBIPQ70UQ0 350 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 HDDC2Q7Z4H3 204 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 OR10Q1Q8NGQ4 319 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 KAT5Q92993 513 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ADAM21Q9UKJ8 722 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 GPR34Q9UPC5 381 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 PCDHAC2Q9Y5I4 1007 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 IRGMA1A4Y4 181 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 TRAPPC6AO75865 159 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 CHRNB4P30926 498 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 STAT5AP42229 794 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 RHAGQ02094 409 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 PLP2Q04941 152 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ARHGAP1Q07960 439 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 KYAT3Q6YP21 454 aaKnown RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 FAM92BQ6ZTR7 304 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 BTN2A1Q7KYR7 527 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ARMC8Q8IUR7 673 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 OR6K2Q8NGY2 324 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 UTP15Q8TED0 518 aaKnown RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 DNASE1L2Q92874 299 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 MTMR8Q96EF0 704 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 DGAT2Q96PD7 388 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 MRPL45Q9BRJ2 306 aaKnown RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 TRMOQ9BU70 441 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ZNF624Q9P2J8 865 aaPredicted RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 CKLFQ9UBR5 152 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 SLC28A2O43868 658 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 CA3P07451 260 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 SLC11A1P49279 550 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 ZNF792Q3KQV3 632 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 AGKQ53H12 422 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
VPS8-227ENST00000625842 USP53Q70EK8 1073 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 SLC26A9Q7LBE3 791 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 TMPRSS11BQ86T26 416 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 STK32CQ86UX6 486 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 TDHQ8IZJ6 230 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 VPS35Q96QK1 796 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 CHKBQ9Y259 395 aa11.03□□□□□ -0.64
VPS8-227ENST00000625842 A8MUI8 341 aa11.02□□□□□ -0.64
VPS8-227ENST00000625842 TCP11X1B4DZS4 312 aa11.02□□□□□ -0.64
VPS8-227ENST00000625842 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.64
VPS8-227ENST00000625842 MYL12BO14950 172 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms