RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
VARS2-213ENST00000625423 ACTR3BQ9P1U1 418 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 TMCO1Q9UM00 188 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 MED16Q9Y2X0 877 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 TDRD15B5MCY1 1934 aaKnown RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 SCN10AQ9Y5Y9 1956 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 RNF103-CHMP3A0A140T963 221 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 CDC7O00311 574 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 ECI2O75521 394 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 IDO1P14902 403 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 AGTR2P50052 363 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 ARPP19P56211 112 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 BNIP2Q12982 314 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 NFE2Q16621 373 aaPredicted RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 RABL3Q5HYI8 236 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 LCN8Q6JVE9 175 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 LPCAT2Q7L5N7 544 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 ALDH16A1Q8IZ83 802 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 PEX13Q92968 403 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■■■■■ 35.3
VARS2-213ENST00000625423 FUBP3Q96I24 572 aaKnown RBP eCLIP11.2□□□□□ -0.62
VARS2-213ENST00000625423 SLC8A2Q9UPR5 921 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 PCDHB5Q9Y5E4 795 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 PCDHA9Q9Y5H5 950 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 GPR45Q9Y5Y3 372 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SEC24DO94855 1032 aaPredicted RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 SERPINF2P08697 491 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 CES1P23141 567 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 FASP25445 335 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 TAF10Q12962 218 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 TYSND1Q2T9J0 566 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 FUT11Q495W5 492 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 ANKS6Q68DC2 871 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 ADGRG5Q8IZF4 528 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 ZNF786Q8N393 782 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SOCS4Q8WXH5 440 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SMIM14Q96QK8 99 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SYTL2Q9HCH5 934 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 GALPQ9UBC7 116 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SLC27A5Q9Y2P5 690 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 SPO11Q9Y5K1 396 aa11.2□□□□□ -0.62
VARS2-213ENST00000625423 HEMK1Q9Y5R4 338 aaPredicted RBP11.2□□□□□ -0.62
VARS2-213ENST00000625423 ENPP3O14638 875 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 INPP4BO15327 924 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 BAIAP3O94812 1187 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 EPOP01588 193 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 ASGR1P07306 291 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 NCK1P16333 377 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CTGFP29279 349 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CDK9P50750 372 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 NFYCQ13952 458 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CYP51A1Q16850 503 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 PAGE3Q5JUK9 113 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 INTS11Q5TA45 600 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 NADSYN1Q6IA69 706 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 MFSD2AQ8NA29 543 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 HM13Q8TCT9 377 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 ESAMQ96AP7 390 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 MYRFLQ96LU7 910 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 NSMCE3Q96MG7 304 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 GPR21Q99679 349 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 ADI1Q9BV57 179 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 DERL2Q9GZP9 239 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CCDC68Q9H2F9 335 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 SPC25Q9HBM1 224 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TAS2R13Q9NYV9 303 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 OAZ3Q9UMX2 235 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 DOCK4Q8N1I0 1966 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 ASPDHA6ND91 283 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 NPEPPSL1A6NEC2 478 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CYBBP04839 570 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CYBAP13498 195 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CASP2P42575 452 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 YBEYP58557 167 aaPredicted RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 TUBA4AP68366 448 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 HPCAP84074 193 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 MERTKQ12866 999 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TTC33Q6PID6 262 aaPredicted RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 GLB1LQ6UWU2 654 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 PACRGLQ8N7B6 248 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 OR4K2Q8NGD2 314 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 FAM81AQ8TBF8 368 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TMEM125Q96AQ2 219 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 RMDN1Q96DB5 314 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 B3GALT6Q96L58 329 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 SLC30A3Q99726 388 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 INTS10Q9NVR2 710 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 SLAMF8Q9P0V8 285 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 A0A1W2PP18 115 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 LCHNA4D1U4 455 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 NDST3O95803 873 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CLIC3O95833 236 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 GSK3BP49841 420 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms