RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 DNPEPQ9ULA0 475 aa18.81■□□□□ 0.6
SMN1-211ENST00000625245 KCNK6Q9Y257 313 aa18.81■□□□□ 0.6
SMN1-211ENST00000625245 PCYT1BQ9Y5K3 369 aaPredicted RBP18.81■□□□□ 0.6
SMN1-211ENST00000625245 OAS3Q9Y6K5 1087 aaKnown RBP18.81■□□□□ 0.6
SMN1-211ENST00000625245 MAST4O15021 2626 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 BSNQ9UPA5 3926 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 MATN3O15232 486 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 NKX2-8O15522 239 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 DNAJC6O75061 913 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 PRKAR1AP10644 381 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 ACP5P13686 325 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 CA4P22748 312 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 MC2RQ01718 297 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 GALNT2Q10471 571 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 TIGD7Q6NT04 549 aaPredicted RBP18.8■□□□□ 0.6
SMN1-211ENST00000625245 NLGN4XQ8N0W4 816 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 BMPERQ8N8U9 685 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 NLGN4YQ8NFZ3 816 aaPredicted RBP18.8■□□□□ 0.6
SMN1-211ENST00000625245 ZNF564Q8TBZ8 553 aaPredicted RBP18.8■□□□□ 0.6
SMN1-211ENST00000625245 LRRN4Q8WUT4 740 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 MAML1Q92585 1016 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 KIAA1143Q96AT1 154 aaPredicted RBP18.8■□□□□ 0.6
SMN1-211ENST00000625245 TDRD1Q9BXT4 1180 aaKnown RBP18.8■□□□□ 0.6
SMN1-211ENST00000625245 HAUS2Q9NVX0 235 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 PDP2Q9P2J9 529 aa18.8■□□□□ 0.6
SMN1-211ENST00000625245 RCOR3Q9P2K3 495 aaPredicted RBP18.8■□□□□ 0.6
SMN1-211ENST00000625245 C1orf232A0A0U1RR37 186 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 A0A1B0GTH6 734 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 MYO1FO00160 1098 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 CAPN5O15484 640 aaPredicted RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 MBD3O95983 291 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 SERPINC1P01008 464 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 MAP4P27816 1152 aaKnown RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 MAN1A1P33908 653 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 NFKBIBQ15653 356 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 IFI16Q16666 785 aaKnown RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 HADHQ16836 314 aaKnown RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 SKIDA1Q1XH10 827 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 ATP13A4Q4VNC1 1196 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 IYDQ6PHW0 289 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 WDR74Q6RFH5 385 aaPredicted RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 CEACAM20Q6UY09 585 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 KDELC2Q7Z4H8 507 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 ARHGAP22Q7Z5H3 698 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 SLC9B2Q86UD5 537 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 UNC5BQ8IZJ1 945 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 SH3KBP1Q96B97 665 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 SLC45A3Q96JT2 553 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 CATSPER2Q96P56 530 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 BPIFA3Q9BQP9 254 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 FAM83DQ9H4H8 585 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 PCDH9Q9HC56 1237 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 SARS2Q9NP81 518 aaKnown RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 VPS18Q9P253 973 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 CNOT6Q9ULM6 557 aaKnown RBP18.79■□□□□ 0.6
SMN1-211ENST00000625245 DOPEY2Q9Y3R5 2298 aa18.79■□□□□ 0.6
SMN1-211ENST00000625245 LOC101059948A0A1B0GTJ6 334 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 PRLP01236 227 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 CCNCP24863 283 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 ANP32AP39687 249 aaKnown RBP18.78■□□□□ 0.6
SMN1-211ENST00000625245 SPINT3P49223 89 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 NIPAL4Q0D2K0 466 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 DPYSL3Q14195 570 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 PAFAH1B3Q15102 231 aaKnown RBP18.78■□□□□ 0.6
SMN1-211ENST00000625245 COLEC12Q5KU26 742 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 HGSNATQ68CP4 663 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 NCBP2-AS2Q69YL0 99 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 ALG1LQ6GMV1 187 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 LYSMD3Q7Z3D4 306 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 KCTD6Q8NC69 237 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 ARRDC2Q8TBH0 407 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 APMAPQ9HDC9 416 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 ZNF71Q9NQZ8 489 aaPredicted RBP18.78■□□□□ 0.6
SMN1-211ENST00000625245 PKD2L2Q9NZM6 624 aa18.78■□□□□ 0.6
SMN1-211ENST00000625245 FADS2P1A8MWK0 482 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 HLA-DQB2P05538 268 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 SLC2A4P14672 509 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 NOP2P46087 812 aaKnown RBP18.77■□□□□ 0.6
SMN1-211ENST00000625245 RPL26P61254 145 aaKnown RBP18.77■□□□□ 0.6
SMN1-211ENST00000625245 NR1I3Q14994 352 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 ANKRD20A8PQ5CZ79 823 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 TIPARPQ7Z3E1 657 aaKnown RBP18.77■□□□□ 0.6
SMN1-211ENST00000625245 FAM71BQ8TC56 605 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 CCHCR1Q8TD31 782 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 WDR24Q96S15 920 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 ZPBPQ9BS86 351 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 HERPUD2Q9BSE4 406 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 EFHD1Q9BUP0 239 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 TBC1D10AQ9BXI6 508 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 RMI1Q9H9A7 625 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 ARFGAP3Q9NP61 516 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 FBXO8Q9NRD0 319 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 TMEM63CQ9P1W3 806 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 AMACRQ9UHK6 382 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 TUBD1Q9UJT1 453 aa18.77■□□□□ 0.6
SMN1-211ENST00000625245 RPL26L1Q9UNX3 145 aaKnown RBP18.77■□□□□ 0.6
SMN1-211ENST00000625245 BZW2Q9Y6E2 419 aaKnown RBP18.77■□□□□ 0.6
SMN1-211ENST00000625245 PTPN13Q12923 2485 aa18.76■□□□□ 0.59
SMN1-211ENST00000625245 POLR1CO15160 346 aaPredicted RBP18.76■□□□□ 0.59
SMN1-211ENST00000625245 GRID2O43424 1007 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms