RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 LYSMD3Q7Z3D4 306 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 HPS6Q86YV9 775 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CLYBLQ8N0X4 340 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 FIBINQ8TAL6 211 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 JADE3Q92613 823 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 KCNJ9Q92806 393 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 RCN3Q96D15 328 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 NAF1Q96HR8 494 aaKnown RBP19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 SLC30A3Q99726 388 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 PLK2Q9NYY3 685 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CLEC4EQ9ULY5 219 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 FNDC3AQ9Y2H6 1198 aaKnown RBP19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 A0A1W2PRU2 124 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 SYCE1LA8MT33 242 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 NRG2O14511 850 aaPredicted RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 NVLO15381 856 aaKnown RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 HTRA2O43464 458 aaPredicted RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 NIPSNAP2O75323 286 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 CDK14O94921 469 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 ESR1P03372 595 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 ADH1AP07327 375 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 CTPS1P17812 591 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 EN2P19622 333 aaPredicted RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 SQLEQ14534 574 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 TSNQ15631 228 aaKnown RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 TPGS1Q6ZTW0 290 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 METTL3Q86U44 580 aaKnown RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 STK40Q8N2I9 435 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 ELMOD1Q8N336 334 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 FIBCD1Q8N539 461 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 KREMEN2Q8NCW0 462 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 OR6K2Q8NGY2 324 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 CCDC124Q96CT7 223 aaKnown RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 GCNAQ96QF7 691 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 EFCAB1Q9HAE3 211 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 NDE1Q9NXR1 346 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 EVLQ9UI08 416 aaPredicted RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 TRMT6Q9UJA5 497 aaKnown RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 LRRC14BA6NHZ5 514 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 SUPT3HB4E1H0 165 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 LEFTY2O00292 366 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 UBDO15205 165 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 SUPT3HO75486 399 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 TSPAN12O95859 305 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 ALPIP09923 528 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 PFKLP17858 780 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 ERFP50548 548 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 BCL2L1Q07817 233 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 CCNIQ14094 377 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 PPP1R3AQ16821 1122 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 MUM1Q2TAK8 710 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 TAS2R42Q7RTR8 314 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 FBXO39Q8N4B4 442 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 KLHL23Q8NBE8 558 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 CD200R1Q8TD46 325 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 DNAJC9Q8WXX5 260 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 FUBP1Q96AE4 644 aaKnown RBP19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 C19orf43Q9BQ61 176 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 P2RY12Q9H244 342 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 ABCB8Q9NUT2 735 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 SLC30A1Q9Y6M5 507 aa19.59■□□□□ 0.73
PCDHB11-202ENST00000624887 CDC7O00311 574 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 CLASP2O75122 1294 aaKnown RBP19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 SOCS5O75159 536 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 ECI2O75521 394 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 GJA1P17302 382 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 HTRA4P83105 476 aaPredicted RBP19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 PLEKHG6Q3KR16 790 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 CERS6Q6ZMG9 384 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 LARP4Q71RC2 724 aaKnown RBP eCLIP19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 PGAM4Q8N0Y7 254 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 SIDT2Q8NBJ9 832 aaKnown RBP19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 CLP1Q92989 425 aaKnown RBP19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 C19orf60Q96EN9 201 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 SERPINI1Q99574 410 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 SLC46A2Q9BY10 475 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 MCOLN1Q9GZU1 580 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 S100A14Q9HCY8 104 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 MID1IP1Q9NPA3 183 aa19.58■□□□□ 0.73
PCDHB11-202ENST00000624887 A0A0J9YYE9 177 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 BTN3A1O00481 513 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 KLK8O60259 260 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 GPC4O75487 556 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 TRBC1P01850 177 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ARSAP15289 507 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ATP6V1C1P21283 382 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 CD70P32970 193 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 IL2P60568 153 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 TCHHL1Q5QJ38 904 aaPredicted RBP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ADGRG6Q86SQ4 1221 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 EFCAB3Q8N7B9 438 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 PPFIBP2Q8ND30 876 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 NSUN5Q96P11 429 aaKnown RBP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 CORO1BQ9BR76 489 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ASAH2Q9NR71 780 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 INTS6Q9UL03 887 aaKnown RBP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 PPM1HQ9ULR3 514 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 DNAJC15Q9Y5T4 150 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 NPEPPSL1A6NEC2 478 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 STX16-NPEPL1H3BU86 382 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms