RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 DEFB115Q30KQ5 88 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 FOXB2Q5VYV0 432 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 ANKS6Q68DC2 871 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CXorf57Q6NSI4 855 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 KIAA1841Q6NSI8 718 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 LAYNQ6UX15 382 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 C16orf59Q7L2K0 433 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PHYKPLQ8IUZ5 450 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 DDIASQ8IXT1 998 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 MIER2Q8N344 545 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 SLAIN1Q8ND83 568 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 RIN3Q8TB24 985 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 MYRFLQ96LU7 910 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 BIRC8Q96P09 236 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 SMIM14Q96QK8 99 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 KCNA7Q96RP8 456 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TSC22D3Q99576 134 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PCDHAC1Q9H158 963 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 HSFX1Q9UBD0 423 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CD300AQ9UGN4 299 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 IKZF3Q9UKT9 509 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 RAB26Q9ULW5 256 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PTGDR2Q9Y5Y4 395 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 USP34Q70CQ2 3546 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 A0A0J9YYE9 177 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CDC7O00311 574 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 BTN3A1O00481 513 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 STX16O14662 325 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 STX7O15400 261 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 VPS4BO75351 444 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CRCPO75575 148 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TMCC1O94876 653 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 GNRH1P01148 92 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 RPS17P08708 135 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 LBPP18428 481 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PEX19P40855 299 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CHN2P52757 468 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 IRX1P78414 480 aaPredicted RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 RHDQ02161 417 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TRAF2Q12933 501 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 RALGDSQ12967 914 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TLR1Q15399 786 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 IL23RQ5VWK5 629 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PSAPL1Q6NUJ1 521 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TXNDC11Q6PKC3 985 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 UGT2A3Q6UWM9 527 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZNF783Q6ZMS7 281 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 HERC6Q8IVU3 1022 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PIANPQ8IYJ0 282 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 MARVELD2Q8N4S9 558 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 EFHBQ8N7U6 833 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TMEM102Q8N9M5 508 aaPredicted RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZNF461Q8TAF7 563 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 ATP6V1E2Q96A05 226 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TUBGCP3Q96CW5 907 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 VN1R3Q9BXE9 311 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 C1QTNF3Q9BXJ4 246 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 RNF38Q9H0F5 515 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TUBB1Q9H4B7 451 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 SEMA4BQ9NPR2 832 aaPredicted RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 GALPQ9UBC7 116 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TRMT6Q9UJA5 497 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 NDUFAF1Q9Y375 327 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 AP4S1Q9Y587 144 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 NPEPPSL1A6NEC2 478 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 H7C0S8 307 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 NR5A2O00482 541 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 AP1G1O43747 822 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 KLK8O60259 260 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 DNAJA2O60884 412 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 RNASEH2AO75792 299 aaKnown RBP8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 ABLIM3O94929 683 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 MATN4O95460 622 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 C1RP00736 705 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 LINC00032P0C843 101 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 HSPA13P48723 471 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 CLCN4P51793 760 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 PLD1Q13393 1074 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 GRB7Q14451 532 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZRANB3Q5FWF4 1079 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 AARS2Q5JTZ9 985 aaKnown RBP8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 CTSL3PQ5NE16 218 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 NCEH1Q6PIU2 408 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 LINGO4Q6UY18 593 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 RNF168Q8IYW5 571 aaPredicted RBP8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 TTC30BQ8N4P2 665 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 SIDT2Q8NBJ9 832 aaKnown RBP8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 WBP2Q969T9 261 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 DUS3LQ96G46 650 aaKnown RBP8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 TRMT2BQ96GJ1 504 aaKnown RBP8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 SCLYQ96I15 445 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 IGSF21Q96ID5 467 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 CYP2S1Q96SQ9 504 aa8.26□□□□□ -1.09
SND1-IT1-201ENST00000623342 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms