RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EXT2Q93063 718 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 TMBIM1Q969X1 311 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 VMP1Q96GC9 406 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 FCRL5Q96RD9 977 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 HGH1Q9BTY7 390 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 ATXN3LQ9H3M9 355 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 PIF1Q9H611 641 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 GLOD4Q9HC38 313 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 DDIT4Q9NX09 232 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 POLG2Q9UHN1 485 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 PCDHGA8Q9Y5G5 932 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 PMPCBO75439 489 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 LRIG2O94898 1065 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 FGF4P08620 206 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 LINC00032P0C843 101 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 NPR3P17342 541 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 ADRA1AP35348 466 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 RABGGTBP53611 331 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 DIO3P55073 304 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 EEFSECP57772 596 aaKnown RBP14.05□□□□□ -0.16
LDB3-209ENST00000623056 NFKB2Q00653 900 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 CRY1Q16526 586 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 FSCN1Q16658 493 aaKnown RBP14.05□□□□□ -0.16
LDB3-209ENST00000623056 PAGE3Q5JUK9 113 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 ZNF484Q5JVG2 852 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 C6orf141Q5SZD1 244 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 KANK2Q63ZY3 851 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 STK32CQ86UX6 486 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 GPC2Q8N158 579 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 MFSD4AQ8N468 514 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 CHDHQ8NE62 594 aaPredicted RBP14.05□□□□□ -0.16
LDB3-209ENST00000623056 PCDH12Q9NPG4 1184 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 ANKMY1Q9P2S6 941 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 OR12D3Q9UGF7 316 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 PDE10AQ9Y233 779 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 BTRCQ9Y297 605 aa14.05□□□□□ -0.16
LDB3-209ENST00000623056 LRRC14BA6NHZ5 514 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 YJEFN3A6XGL0 299 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 DFFAO00273 331 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 MSI1O43347 362 aaKnown RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 MYO1DO94832 1006 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 SIX3O95343 332 aaPredicted RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 RCVRNP35243 200 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 PCYT1AP49585 367 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 GP2P55259 537 aaKnown RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 CDKN2DP55273 166 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 KCNK10P57789 538 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 SELENBP1Q13228 472 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 MAPRE1Q15691 268 aaKnown RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 MEP1AQ16819 746 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 ARL13BQ3SXY8 428 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 LBX2Q6XYB7 198 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CATSPER4Q7RTX7 472 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 FBXO16Q8IX29 292 aaPredicted RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 KCTD13Q8WZ19 329 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 PTERQ96BW5 349 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 TNIP3Q96KP6 325 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 TEX37Q96LM6 180 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CYP2S1Q96SQ9 504 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CGREF1Q99674 301 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CTRCQ99895 268 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 R3HDMLQ9H3Y0 253 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 TOR3AQ9H497 397 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 LTB4R2Q9NPC1 389 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 SLAMF8Q9P0V8 285 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 POU2F3Q9UKI9 436 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 ERVK-11Q9UQG0 969 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 GPR45Q9Y5Y3 372 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 INMTO95050 263 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 PGK2P07205 417 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CDH1P12830 882 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 HTR1EP28566 365 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CASP2P42575 452 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 OR4D2P58180 307 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 GABARAPL2P60520 117 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 INAQ16352 499 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CTU2Q2VPK5 515 aaKnown RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 DCAF4L1Q3SXM0 396 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 THOC7Q6I9Y2 204 aaKnown RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 PLEKHG7Q6ZR37 379 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 CLEC20AQ6ZU45 233 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 PTGR2Q8N8N7 351 aaPredicted RBP14.04□□□□□ -0.16
LDB3-209ENST00000623056 APPL2Q8NEU8 664 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 SH3RF2Q8TEC5 729 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 FSD1LQ9BXM9 530 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 ULBP1Q9BZM6 244 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 TPK1Q9H3S4 243 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 SIAEQ9HAT2 523 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 PCDHB3Q9Y5E6 796 aa14.04□□□□□ -0.16
LDB3-209ENST00000623056 DEAF1O75398 565 aaPredicted RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 PRSS23O95084 383 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 WISP3O95389 354 aaPredicted RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 ZFP36L2P47974 494 aaKnown RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 GEMP55040 296 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 RCAN2Q14206 197 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 NOMO2Q5JPE7 1267 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms