RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 CACNG1Q06432 222 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 BNIP1Q12981 228 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 DGKKQ5KSL6 1271 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 DNAJC5GQ8N7S2 189 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 MDGA1Q8NFP4 955 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 ACOX2Q99424 681 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 OLFM1Q99784 485 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 FAM83DQ9H4H8 585 aa15.64■□□□□ 0.1
CPSF1-213ENST00000620219 PRR5-ARHGAP8B1AHC4 643 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 H3BQ06 376 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-213ENST00000620219 PLK4O00444 970 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ATP5HO75947 161 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 DLDP09622 509 aaKnown RBP15.64■□□□□ 0.09
CPSF1-213ENST00000620219 TCN1P20061 433 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-213ENST00000620219 GPR1P46091 355 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ARHGAP8P85298 464 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ZXDBP98169 803 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 NCEH1Q6PIU2 408 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 Q6ZVL8 140 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 SLC22A9Q8IVM8 553 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 LMNTD2Q8IXW0 634 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 MAFFQ9ULX9 164 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 LZTS1Q9Y250 596 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 LDB2O43679 373 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ADRA1AP35348 466 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 SLC18A1P54219 525 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ELF3P78545 371 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-213ENST00000620219 DSG4Q86SJ6 1040 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ELOVL2Q9NXB9 296 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 TTC23LQ6PF05 361 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 LILRA6Q6PI73 481 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 TMEM159Q96B96 161 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 AP2M1Q96CW1 435 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 FOPNLQ96NB1 174 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 HBEGFQ99075 208 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 TBC1D10AQ9BXI6 508 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ARL15Q9NXU5 204 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ADA2Q9NZK5 511 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 GNPTGQ9UJJ9 305 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 BTRCQ9Y297 605 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 DOCK6Q96HP0 2047 aa15.64■□□□□ 0.09
CPSF1-213ENST00000620219 ATXN1LP0C7T5 689 aaKnown RBP15.63■□□□□ 0.09
CPSF1-213ENST00000620219 STC1P52823 247 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 CRY1Q16526 586 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 NKAPQ8N5F7 415 aaKnown RBP15.63■□□□□ 0.09
CPSF1-213ENST00000620219 PCDH20Q8N6Y1 951 aaKnown RBP15.63■□□□□ 0.09
CPSF1-213ENST00000620219 OR13J1Q8NGT2 312 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 ERVW-1Q9UQF0 538 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 ARHGEF15O94989 841 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 ABRQ12979 859 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 CLEC6AQ6EIG7 209 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 CRTC3Q6UUV7 619 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 HGH1Q9BTY7 390 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 ZDHHC7Q9NXF8 308 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 LATS1O95835 1130 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 S1PR4O95977 384 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 SLC35E2BP0CK96 405 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 GABRB3P28472 473 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 EEF1DP29692 281 aaKnown RBP15.63■□□□□ 0.09
CPSF1-213ENST00000620219 FUT11Q495W5 492 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 KIAA1324Q6UXG2 1013 aaKnown RBP15.63■□□□□ 0.09
CPSF1-213ENST00000620219 COG4Q9H9E3 785 aa15.63■□□□□ 0.09
CPSF1-213ENST00000620219 TMEM233B4DJY2 109 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 RNASEH2AO75792 299 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 APODP05090 189 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 C1orf146Q5VVC0 180 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 PIANPQ8IYJ0 282 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 SAMD11Q96NU1 681 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 TRMT61BQ9BVS5 477 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 EMCNQ9ULC0 261 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 COQ6Q9Y2Z9 468 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 IPO13O94829 963 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 SLC6A11P48066 632 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 CDKN2DP55273 166 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 CREB5Q02930 508 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 FAM78AQ5JUQ0 283 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 ZNF783Q6ZMS7 281 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 CXorf40AQ8TE69 158 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 PANX3Q96QZ0 392 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 DRC3Q9H069 523 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 KCNK4Q9NYG8 393 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 SUN2Q9UH99 717 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 PDCD11Q14690 1871 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 DLX3O60479 287 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 MMP2P08253 660 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 MAT2AP31153 395 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 PIK3CGP48736 1102 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 PIWIL4Q7Z3Z4 852 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 MED8Q96G25 268 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 YBX2Q9Y2T7 364 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 A0A0J9YYE9 177 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 LOC285095A0A1B0GVY8 99 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 CDC7O00311 574 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 H2AFYO75367 372 aaKnown RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 TRBC1P01850 177 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 FGF3P11487 239 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-213ENST00000620219 TIFABQ6ZNK6 161 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 CRIPAKQ8N1N5 446 aa15.62■□□□□ 0.09
CPSF1-213ENST00000620219 TEX9Q8N6V9 391 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms