RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 FAM83DQ9H4H8 585 aa11.83□□□□□ -0.52
UPF3B-204ENST00000619445 SARS2Q9NP81 518 aaKnown RBP11.83□□□□□ -0.52
UPF3B-204ENST00000619445 PDP2Q9P2J9 529 aa11.83□□□□□ -0.52
UPF3B-204ENST00000619445 CD84Q9UIB8 345 aa11.83□□□□□ -0.52
UPF3B-204ENST00000619445 HEMK1Q9Y5R4 338 aaPredicted RBP11.83□□□□□ -0.52
UPF3B-204ENST00000619445 KIR2DS5A0A0G2JLQ3 304 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 A0A0G2JNG1 304 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 KIR2DS3K7RE56 304 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 PPP1R12AO14974 1030 aaPredicted RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 CBFA2T2O43439 604 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 TMEM253P0C7T8 217 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 THRAP10827 490 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 GJC1P36383 396 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 ETV5P41161 510 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 NOP2P46087 812 aaKnown RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 SPINT3P49223 89 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 EPHA4P54764 986 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 IFI35P80217 286 aaPredicted RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 PPIDQ08752 370 aaKnown RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 KIR2DS5Q14953 304 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 PDK1Q15118 436 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 ODF2Q5BJF6 829 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 DCAF12Q5T6F0 453 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 HENMT1Q5T8I9 393 aaKnown RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 BZW1Q7L1Q6 419 aaKnown RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 LYSMD3Q7Z3D4 306 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 TMPRSS9Q7Z410 1059 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 SLC9B2Q86UD5 537 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 PHYKPLQ8IUZ5 450 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 SFTPA2Q8IWL1 248 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 RHOT2Q8IXI1 618 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 LPCAT1Q8NF37 534 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 OR8K1Q8NGG5 319 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 ARRDC2Q8TBH0 407 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 RNF157Q96PX1 679 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 ZSCAN5AQ9BUG6 496 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 EFHD1Q9BUP0 239 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 MAK16Q9BXY0 300 aaKnown RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 CARD9Q9H257 536 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 NFKBIL1Q9UBC1 381 aaPredicted RBP11.82□□□□□ -0.52
UPF3B-204ENST00000619445 ZNHIT2Q9UHR6 403 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 NENFQ9UMX5 172 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 TMEM98Q9Y2Y6 226 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 SDK2Q58EX2 2172 aa11.82□□□□□ -0.52
UPF3B-204ENST00000619445 PPM1DO15297 605 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 CLDN7O95471 211 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 PRLP01236 227 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 HLA-DQB2P05538 268 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 KDELR1P24390 212 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 CASP14P31944 242 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 PPM1FP49593 454 aaPredicted RBP11.81□□□□□ -0.52
UPF3B-204ENST00000619445 CLCNKAP51800 687 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 DCDC1P59894 354 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 HHEXQ03014 270 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 TGIF1Q15583 401 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.81□□□□□ -0.52
UPF3B-204ENST00000619445 LRRC38Q5VT99 294 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 CCDC70Q6NSX1 233 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 ZNF574Q6ZN55 896 aaPredicted RBP11.81□□□□□ -0.52
UPF3B-204ENST00000619445 MARK2Q7KZI7 788 aaKnown RBP11.81□□□□□ -0.52
UPF3B-204ENST00000619445 ZFAND4Q86XD8 727 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 IL22RA1Q8N6P7 574 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 PQLC3Q8N755 202 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 SLC37A2Q8TED4 501 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 DTLQ9NZJ0 730 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 FOXJ2Q9P0K8 574 aa11.81□□□□□ -0.52
UPF3B-204ENST00000619445 LRRD1A4D1F6 860 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 APOL1O14791 398 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 INPP4BO15327 924 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 AKR1B10O60218 316 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 DNAJC6O75061 913 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 JCHAINP01591 159 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 FGF3P11487 239 aaPredicted RBP11.8□□□□□ -0.52
UPF3B-204ENST00000619445 CCL4P13236 92 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 F3P13726 295 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 CD86P42081 329 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 SLC1A1P43005 524 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 TNNT3P45378 269 aaPredicted RBP11.8□□□□□ -0.52
UPF3B-204ENST00000619445 GBE1Q04446 702 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 QPCTQ16769 361 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 ATP13A4Q4VNC1 1196 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 IYDQ6PHW0 289 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 CEACAM20Q6UY09 585 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 CHST15Q7LFX5 561 aaPredicted RBP11.8□□□□□ -0.52
UPF3B-204ENST00000619445 NT5DC3Q86UY8 548 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 RCBTB1Q8NDN9 531 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 PATE1Q8WXA2 126 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 ART4Q93070 314 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 CATSPER2Q96P56 530 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 ADNPQ9H2P0 1102 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 TRIT1Q9H3H1 467 aaKnown RBP11.8□□□□□ -0.52
UPF3B-204ENST00000619445 UCK1Q9HA47 277 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 ZFYVE1Q9HBF4 777 aa11.8□□□□□ -0.52
UPF3B-204ENST00000619445 MAGEE1Q9HCI5 957 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms