RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CDH19Q9H159 772 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 GBA3Q9H227 469 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 GAREM1Q9H706 876 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 FZD3Q9NPG1 666 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TM7SF3Q9NS93 570 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 INTS9Q9NV88 658 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 B4GALT6Q9UBX8 382 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 FETUBQ9UGM5 382 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 EIF2B4Q9UI10 523 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ANGPTL2Q9UKU9 493 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 RPL26L1Q9UNX3 145 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 COQ6Q9Y2Z9 468 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PPIL1Q9Y3C6 166 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 NEU2Q9Y3R4 380 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SPO11Q9Y5K1 396 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CSNK1G3Q9Y6M4 447 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PLXNA2O75051 1894 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PCDH15Q96QU1 1955 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 APC2O95996 2303 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ASXL3Q9C0F0 2248 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 A0A0J9YYE9 177 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 A0A1B0GTQ1 180 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 LOC285095A0A1B0GVY8 99 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 A0A1W2PR77 199 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TCRBV7S3A2A0A539 114 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 RGSL1A5PLK6 1076 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 NPIPB15A6NHN6 443 aaPredicted RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CCT8L1PA6NM43 557 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GOLGA8CPA6NN73 597 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 H0Y8X5 98 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 H3BM21 787 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 FPGTO14772 594 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TPP1O14773 563 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 AURKAO14965 403 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 SLC31A1O15431 190 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TTI1O43156 1089 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ZW10O43264 779 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TNFSF14O43557 240 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GDF9O60383 454 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 HNRNPCL1O60812 293 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MMP20O60882 483 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CBFA2T3O75081 653 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 USP12O75317 370 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PMPCBO75439 489 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 RASSF9O75901 435 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 SUN1O94901 812 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 DKK1O94907 266 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TRBC1P01850 177 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GP1BAP07359 652 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ABHD2P08910 425 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PIRTP0C851 137 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KELP23276 732 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 HTR1BP28222 390 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TEAD1P28347 426 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PMLP29590 882 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 HNRNPH1P31943 449 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 RPL22P35268 128 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 HNF1BP35680 557 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GRIA1P42261 906 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 SKIV2L2P42285 1042 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PTGIRP43119 386 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 RASSF2P50749 326 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ATP1A2P50993 1020 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 DUSP3P51452 185 aaPredicted RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MNAT1P51948 309 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PLTPP55058 493 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 WNT3AP56704 352 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CLDN2P57739 230 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 NXPH1P58417 271 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MAGOHP61326 146 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MRPS25P82663 173 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GUCY1A3Q02108 690 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CBLBQ13191 982 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CAMK2BQ13554 666 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GALNT3Q14435 633 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TRIP6Q15654 476 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 SLC14A2Q15849 920 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PCSK7Q16549 785 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 HLA-BQ31612 363 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ARMC12Q5T9G4 340 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KCTD16Q68DU8 428 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KCTD11Q693B1 232 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 LVRNQ6Q4G3 990 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CRTC1Q6UUV9 634 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 LIPIQ6XZB0 460 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KYAT3Q6YP21 454 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 DPPA4Q7L190 304 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PID1Q7Z2X4 250 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KDELC2Q7Z4H8 507 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 HSD11B1LQ7Z5J1 315 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ABI3BPQ7Z7G0 1075 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TTC7BQ86TV6 843 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 NAXDQ8IW45 347 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TTC30BQ8N4P2 665 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ZCCHC9Q8N567 271 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 FAM181AQ8N9Y4 354 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TTC13Q8NBP0 860 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 OR2I1PQ8NGU4 316 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PDCD6IPQ8WUM4 868 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms