RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	RPS8	P62241	208 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ADAM17	P78536	824 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SOX4	Q06945	474 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KARS	Q15046	597 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC35G1	Q2M3R5	365 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ANKRD20A4	Q4UJ75	823 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	BCL7A	Q4VC05	210 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	BMP2KL	Q5H9B9	411 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PRSS57	Q6UWY2	283 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NPSR1	Q6W5P4	371 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PRR23C	Q6ZRP0	262 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MIGA2	Q7L4E1	593 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PXK	Q7Z7A4	578 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	USP37	Q86T82	979 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LINC00523	Q86TU6	105 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AMZ2	Q86W34	360 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CROCCP3	Q8IVE0	287 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ELMOD2	Q8IZ81	293 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DIO2	Q92813	273 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FBXO32	Q969P5	355 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	APOPT1	Q96IL0	206 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TEKT5	Q96M29	485 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZBTB18	Q99592	522 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OSMR	Q99650	979 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SEC22C	Q9BRL7	303 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GON7	Q9BXV9	100 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC22A4	Q9H015	551 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ARHGEF4	Q9NR80	690 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EXD2	Q9NVH0	621 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CMTM6	Q9NX76	183 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PI4KB	Q9UBF8	816 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNRF3	Q9ULT6	936 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FZD10	Q9ULW2	581 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RNF24	Q9Y225	148 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NCKAP1	Q9Y2A7	1128 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	IRS2	Q9Y4H2	1338 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	COL1A1	P02452	1464 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LGALS16	A8MUM7	142 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	UBE2Q2L	H0YL09	131 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF263	O14978	683 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KIAA0391	O15091	583 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KCNAB3	O43448	404 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SERPINI2	O75830	405 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PRPF6	O94906	941 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	VNN1	O95497	513 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SERPINA5	P05154	406 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CDC25B	P30305	580 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ADCYAP1R1	P41586	468 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ACTR1B	P42025	376 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC1A6	P48664	564 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TOB1	P50616	345 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NKX2-5	P52952	324 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PSMD4	P55036	377 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SCAND1	P57086	179 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DCDC1	P59894	354 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RPL10A	P62906	217 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ECT2L	Q008S8	904 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SPIB	Q01892	262 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NHLH1	Q02575	133 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TROAP	Q12815	778 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NAB1	Q13506	487 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MOGAT2	Q3SYC2	334 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KRT79	Q5XKE5	535 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLFN12L	Q6IEE8	588 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NAPEPLD	Q6IQ20	393 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TTI2	Q6NXR4	508 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TTC33	Q6PID6	262 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NXPE4	Q6UWF7	544 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	COPS6	Q7L5N1	327 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PLPPR4	Q7Z2D5	763 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	C12orf40	Q86WS4	652 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CCDC28A	Q8IWP9	274 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	THEM5	Q8N1Q8	247 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AGGF1	Q8N302	714 aa	eCLIP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TSEN15	Q8WW01	171 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	JADE3	Q92613	823 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NKD2	Q969F2	451 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RFT1	Q96AA3	541 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EME1	Q96AY2	570 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ARHGEF26	Q96DR7	871 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	APOLD1	Q96LR9	279 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TBC1D32	Q96NH3	1257 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CSPG4P5	Q96PW8	444 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NEURL2	Q9BR09	285 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FAM105A	Q9NUU6	356 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DDX43	Q9NXZ2	648 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MTMR4	Q9NYA4	1195 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	BTBD7	Q9P203	1132 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PEF1	Q9UBV8	284 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DNPEP	Q9ULA0	475 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC6A14	Q9UN76	642 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TLR6	Q9Y2C9	796 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SALL3	Q9BXA9	1300 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TRAV20	A0A0B4J274	112 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TRIM49B	A6NDI0	452 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FAM170B	A6NMN3	283 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LINC00587	B1AMM8	73 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	WDR64	B1ANS9	1081 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836		F8W036	122 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms