RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TCAF1Q9Y4C2 921 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 A0A0J9YVX5 310 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 PLOD3O60568 738 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 MSX2P35548 267 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 PITPNAQ00169 270 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 IKBKEQ14164 716 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TEAD4Q15561 434 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 MBLAC2Q68D91 279 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ERAP2Q6P179 960 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CYS1Q717R9 158 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CCDC28AQ8IWP9 274 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ARL15Q9NXU5 204 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TRPC4Q9UBN4 977 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TFECO14948 347 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CXCR2P25025 360 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 OR1E1P30953 314 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TOP6BLQ8N6T0 577 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CMASQ8NFW8 434 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 SLC9A7Q96T83 725 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 MYOZ2Q9NPC6 264 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 SNTG2Q9NY99 539 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ABI2Q9NYB9 513 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 XRN1Q8IZH2 1706 aaKnown RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 RPP40O75818 363 aaKnown RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TMEM63AO94886 807 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ANXA8P13928 327 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 PTPN3P26045 913 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ENTPD1P49961 510 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CTBP1Q13363 440 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CYP2A13Q16696 494 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 SHROOM1Q2M3G4 852 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 KIAA0930Q6ICG6 404 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 SLC22A16Q86VW1 577 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 CSGALNACT1Q8TDX6 532 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 KBTBD7Q8WVZ9 684 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TMEM159Q96B96 161 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 KCNN2Q9H2S1 579 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 KCNH4Q9UQ05 1017 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 POLR3HQ9Y535 204 aaPredicted RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TBX1O43435 398 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ABCG1P45844 678 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ELAVL2Q12926 359 aaKnown RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 DPY19L1Q2PZI1 675 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 RASAL3Q86YV0 1011 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 HID1Q8IV36 788 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 ANKFN1Q8N957 763 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 TMEM39BQ9GZU3 492 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 C12orf65Q9H3J6 166 aaKnown RBP10.22□□□□□ -0.77
CUL4A-212ENST00000617546 C12orf4Q9NQ89 552 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 SEC14L4Q9UDX3 406 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 B3GNT3Q9Y2A9 372 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
CUL4A-212ENST00000617546 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CXCR6O00574 342 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CATP04040 527 aaKnown RBP10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CD36P16671 472 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 SLC6A2P23975 617 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 EFEMP1Q12805 493 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 IL18Q14116 193 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 ZNF517Q6ZMY9 492 aaPredicted RBP10.21□□□□□ -0.77
CUL4A-212ENST00000617546 MEIOBQ8N635 442 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 GANCQ8TET4 914 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 COPS4Q9BT78 406 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 ZYG11BQ9C0D3 744 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CLCA2Q9UQC9 943 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 SEMA3DO95025 777 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CYP2A6P11509 494 aaPredicted RBP10.21□□□□□ -0.77
CUL4A-212ENST00000617546 IMPDH1P20839 514 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CD86P42081 329 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 PNLIPRP1P54315 467 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 IRF8Q02556 426 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CLCQ05315 142 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 MYLK3Q32MK0 819 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 ZNF404Q494X3 552 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 TPRG1LQ5T0D9 272 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 ARMC12Q5T9G4 340 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 SLC9A4Q6AI14 798 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 SLITRK4Q8IW52 837 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 SLC34A3Q8N130 599 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 FSTL5Q8N475 847 aaPredicted RBP10.21□□□□□ -0.77
CUL4A-212ENST00000617546 ZNF557Q8N988 423 aaPredicted RBP10.21□□□□□ -0.77
CUL4A-212ENST00000617546 NSMCE3Q96MG7 304 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
CUL4A-212ENST00000617546 PDCD10Q9BUL8 212 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
CUL4A-212ENST00000617546 A0A088AWK7 358 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 E7ESA3 106 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 TNFRSF11BO00300 401 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 WWP2O00308 870 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 MRPS14O60783 128 aaKnown RBP10.21□□□□□ -0.78
CUL4A-212ENST00000617546 PIAS1O75925 651 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 OR6B1O95007 311 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 TYMPP19971 482 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 SLC15A1P46059 708 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 FBXW4P57775 412 aa10.21□□□□□ -0.78
CUL4A-212ENST00000617546 DNAJB13P59910 316 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms