RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CBX7O95931 251 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TPOP07202 933 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 NOS3P29474 1203 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 DNAJA1P31689 397 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 PRIM2P49643 509 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 AGAP9Q5VTM2 703 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ADAM7Q9H2U9 754 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TLR6Q9Y2C9 796 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ONECUT3O60422 494 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 DTNBO60941 627 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 OXSR1O95747 527 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 LATS1O95835 1130 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 POU2F2P09086 479 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PTGS1P23219 599 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 POU5F1BQ06416 359 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.34□□□□□ -1.87
LPP-220ENST00000617246 PDIA5Q14554 519 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 LACTB2Q53H82 288 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 SMPDL3BQ92485 455 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 RAD51AP1Q96B01 352 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 RMND5BQ96G75 393 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 TM6SF1Q9BZW5 370 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 LRRC40Q9H9A6 602 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 LIMD1Q9UGP4 676 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 KCTD3Q9Y597 815 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TAF6LQ9Y6J9 622 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CCDC160A6NGH7 325 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 M0QZ24 198 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 NR3C1P04150 777 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CYBAP13498 195 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CHRNB2P17787 502 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SLC6A11P48066 632 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 POLD2P49005 469 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CLCQ05315 142 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 AMHR2Q16671 573 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 GRAMD1BQ3KR37 738 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZNF483Q8TF39 744 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 CCM2Q9BSQ5 444 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 C6orf62Q9GZU0 229 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 TRABDQ9H4I3 376 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SMPD4Q9NXE4 827 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 KCNJ18B7U540 433 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 RNASET2O00584 256 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 ACKR2O00590 384 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PDE9AO76083 593 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 GSTM1P09488 218 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 C1SP09871 688 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TYRP14679 529 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CD72P21854 359 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 FBLN1P23142 703 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 GTF2H1P32780 548 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 GSTM4Q03013 218 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 KCNJ12Q14500 433 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 EXOC3L1Q86VI1 746 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CCNJLQ8IV13 435 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SCCPDHQ8NBX0 429 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PPP1R10Q96QC0 940 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 BARHL1Q9BZE3 327 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 REXO4Q9GZR2 422 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 TASP1Q9H6P5 420 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 HEPACAM2A8MVW5 462 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PCDH17O14917 1159 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 LHCGRP22888 699 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SPAM1P38567 509 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TRIM71Q2Q1W2 868 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 MON1BQ7L1V2 547 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 GDF7Q7Z4P5 450 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 GPALPP1Q8IXQ4 340 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZMIZ2Q8NF64 920 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZDHHC1Q8WTX9 485 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CEP19Q96LK0 163 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CHID1Q9BWS9 393 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZNF518BQ9C0D4 1074 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PPP1R14DQ9NXH3 145 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 C2CD2Q9Y426 696 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 A0A1B0GUH1 482 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 RWDD2BP57060 319 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 FAM45BPQ6NSW5 357 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 GFRALQ6UXV0 394 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 KIAA0907Q7Z7F0 614 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 EID2Q8N6I1 236 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 FAM45AQ8TCE6 357 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 RBM18Q96H35 190 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 BTN2A3PQ96KV6 586 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ASB2Q96Q27 587 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 CADM1Q9BY67 442 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 PRDM8Q9NQV8 689 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 UCKL1Q9NWZ5 548 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 MOCS1Q9NZB8 636 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 SH3BP4Q9P0V3 963 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 OGDHLQ9ULD0 1010 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PER1O15534 1290 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 ADAMTS4O75173 837 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 SEC31AO94979 1220 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 AGR2O95994 175 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TCEA1P23193 301 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 GCH1P30793 250 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 HOXA9P31269 272 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ACOT2P49753 483 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 EHHADHQ08426 723 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms