RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 GPR161Q8N6U8 529 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 OR4L1Q8NH43 312 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 FAM174AQ8TBP5 190 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 BTN2A2Q8WVV5 523 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 FUBP1Q96AE4 644 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 C9orf72Q96LT7 481 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 LGR4Q9BXB1 951 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 TEX101Q9BY14 249 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 PHACTR1Q9C0D0 580 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 ARFGAP3Q9NP61 516 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 PHPT1Q9NRX4 125 aaPredicted RBP15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 TMPRSS11EQ9UL52 423 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 FAM169AQ9Y6X4 670 aa15.51■□□□□ 0.07
PCDHGC3-204ENST00000617222 A0A1B0GVT2 93 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 GOLGA8KD6RF30 607 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 GOLGA8TH3BQL2 631 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 TLR4O00206 839 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CACNB4O00305 520 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 TOR1BO14657 336 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 SLC25A14O95258 325 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 RETP07949 1114 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 ARNTP27540 789 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 FOXN2P32314 431 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 HOXD12P35452 270 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 MPLP40238 635 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 ARCN1P48444 511 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CDKN1CP49918 316 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 AFF3P51826 1226 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 C21orf59P57076 290 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 YPEL5P62699 121 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CACNG1Q06432 222 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 OVGP1Q12889 678 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 NFATC2Q13469 925 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 ITGA9Q13797 1035 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CRYMQ14894 314 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CCDC6Q16204 474 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 SPANXN3Q5MJ09 141 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 TPRG1LQ5T0D9 272 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 ZNF648Q5T619 568 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 PEAR1Q5VY43 1037 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 KIAA0930Q6ICG6 404 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 AFTPHQ6ULP2 937 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CCNI2Q6ZMN8 369 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CEP128Q6ZU80 1094 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 SNX20Q7Z614 316 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 TRIM74Q86UV6 250 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 IQCHQ86VS3 1027 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 GSPT2Q8IYD1 628 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 RUBCNQ92622 972 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 GLYATL1Q969I3 302 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 SKA1Q96BD8 255 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 HIC2Q96JB3 615 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 TSPYL1Q9H0U9 437 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 PLAC1Q9HBJ0 212 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 C20orf96Q9NUD7 363 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 IL1RAPL1Q9NZN1 696 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 RAPGEFL1Q9UHV5 662 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 CRLS1Q9UJA2 301 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 PCDHGA5Q9Y5G8 931 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 LRRK1Q38SD2 2015 aa15.5■□□□□ 0.07
PCDHGC3-204ENST00000617222 PATE3B3GLJ2 98 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 VILLO15195 856 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 MAGEC1O60732 1142 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 LMNAP02545 664 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 CFIP05156 583 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 HOXC4P09017 264 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 FAM153BP0C7A2 387 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 MYBL2P10244 700 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 MYCLP1P12525 358 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 TNFRSF8P28908 595 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 THOP1P52888 689 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 VSNL1P62760 191 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 PDE1CQ14123 709 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 NFATC4Q14934 902 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 LONRF1Q17RB8 773 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 FAM153CQ494X1 144 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 GPR33Q49SQ1 333 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 FASTKD1Q53R41 847 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 STEAP4Q687X5 459 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 PSAPL1Q6NUJ1 521 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 ENPP7Q6UWV6 458 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 CAPN12Q6ZSI9 719 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 RABEPKQ7Z6M1 372 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 DCP2Q8IU60 420 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 PIANPQ8IYJ0 282 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 UNC5BQ8IZJ1 945 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 SLC22A18ASQ8N1D0 253 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 PNPLA1Q8N8W4 532 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 EIF1ADQ8N9N8 165 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 CEP76Q8TAP6 659 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 GDAP1Q8TB36 358 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 ULK4Q96C45 1275 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 COX14Q96I36 57 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 VPS35Q96QK1 796 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 SMOC1Q9H4F8 434 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 GMEB2Q9UKD1 530 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 ANKRD6Q9Y2G4 727 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 TMEM98Q9Y2Y6 226 aa15.49■□□□□ 0.07
PCDHGC3-204ENST00000617222 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms