RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 SKIV2LQ15477 1246 aaKnown RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NOMO2Q5JPE7 1267 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CENPLQ8N0S6 344 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LEMD2Q8NC56 503 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 STON2Q8WXE9 905 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PIK3R3Q92569 461 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 VPS35Q96QK1 796 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF670Q9BS34 389 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 INTS7Q9NVH2 962 aaKnown RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 USE1Q9NZ43 259 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SLC2A6Q9UGQ3 507 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 C3orf18Q9UK00 162 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CDH9Q9ULB4 789 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CDH7Q9ULB5 785 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MYO10Q9HD67 2058 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MMP10P09238 476 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CPB1P15086 417 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CAPN3P20807 821 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 IL4RP24394 825 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CHRNA5P30532 468 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 GPD2P43304 727 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 STAT5BP51692 787 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 DGKEP52429 567 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CAPSQ13938 189 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 DCLRE1AQ6PJP8 1040 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 DET1Q7L5Y6 550 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 OR8H1Q8NGG4 311 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 OR5H6Q8NGV6 325 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ADAMTS16Q8TE57 1224 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PPP1R13LQ8WUF5 828 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 EDEM1Q92611 657 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ACOX2Q99424 681 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SP140LQ9H930 580 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TPRKBQ9Y3C4 175 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LCKP06239 509 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LBPP18428 481 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CHRNA4P43681 627 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ASPAP45381 313 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PIK3CGP48736 1102 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 BNIP2Q12982 314 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TSTA3Q13630 321 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SMN1Q16637 294 aaKnown RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ARMCX4Q5H9R4 360 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TRNP1Q6NT89 227 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ST6GALNAC4Q9H4F1 302 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TIGARQ9NQ88 270 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF277Q9NRM2 450 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CMTM6Q9NX76 183 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ADGRE2Q9UHX3 823 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 VPS4AQ9UN37 437 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LACTBL1A8MY62 500 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 IL18RAPO95256 599 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PIRTP0C851 137 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NPR1P16066 1061 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SPNP16150 400 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ARNTP27540 789 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 POU1F1P28069 291 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 UQCRC1P31930 480 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ADPRMQ3LIE5 342 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 KLHL17Q6TDP4 642 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ST13P5Q8NFI4 369 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PHOX2BQ99453 314 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MRPL57Q9BQC6 102 aaKnown RBP13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AGPAT4Q9NRZ5 378 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 FBXO5Q9UKT4 447 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AQP12BA6NM10 295 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 I3L521 148 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 M0QX08 132 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 EPN2O95208 641 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 APBA3O96018 575 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ICAM1P05362 532 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CASP3P42574 277 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 DGKQP52824 942 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 MAMDC4Q6UXC1 1216 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 C15orf39Q6ZRI6 1047 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ADGRG5Q8IZF4 528 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 OR13J1Q8NGT2 312 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NUDT8Q8WV74 236 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SEPT1Q8WYJ6 367 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CDHR1Q96JP9 859 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 C3orf30Q96M34 536 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ACTR3BQ9P1U1 418 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 A8MUA0 341 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 A8MX80 341 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 FAM25AB3EWG3 89 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 FAM25CB3EWG5 89 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 FAM25GB3EWG6 89 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 GPIP06744 558 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SLC35E2BP0CK96 405 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 OR4D2P58180 307 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RUNX1T1Q06455 604 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PWP1Q13610 501 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SURF1Q15526 300 aa13.94□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CLPPQ16740 277 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms