RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NDUFA9Q16795 377 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 INTS11Q5TA45 600 aaKnown RBP9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 C22orf39Q6P5X5 142 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 Q6ZVU0 165 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 SRFBP1Q8NEF9 429 aaKnown RBP9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 SPPL2AQ8TCT8 520 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 FIG4Q92562 907 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC2A13Q96QE2 648 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 ZIC5Q96T25 663 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 LMAN2LQ9H0V9 348 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 DPEP2Q9H4A9 486 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 WDR26Q9H7D7 661 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 WDR6Q9NNW5 1121 aaKnown RBP9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 MYH6P13533 1939 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 LATS1O95835 1130 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 C8GP07360 202 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CA3P07451 260 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF30P17039 623 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CMPK1P30085 196 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 VIPR1P32241 457 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SERINC3Q13530 473 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 LAPTM5Q13571 262 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 TRMT5Q32P41 509 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC9A4Q6AI14 798 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 GPR156Q8NFN8 814 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SPOCK2Q92563 424 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SAR1AQ9NR31 198 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF840PA6NDX5 716 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 TRAFD1O14545 582 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 NDUFB5O43674 189 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SASH3O75995 380 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 UQCRBP14927 111 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 RPIAP49247 311 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 PITRM1Q5JRX3 1037 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 C10orf107Q8IVU9 208 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 COL26A1Q96A83 441 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 BTBD1Q9H0C5 482 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 HPS4Q9NQG7 708 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 LEF1Q9UJU2 399 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 UPK3BL1B0FP48 263 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 UPK3BL2E5RIL1 263 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CCL22O00626 93 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 FKBP6O75344 327 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ANXA6P08133 673 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CCNHP51946 323 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 RPL26P61254 145 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 DYNC1I2Q13409 638 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 MARCH8Q5T0T0 291 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 LDB1Q86U70 411 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 LCN9Q8WX39 176 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SMARCD2Q92925 531 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 RAD51AP1Q96B01 352 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SMG9Q9H0W8 520 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CCDC177Q9NQR7 707 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SPHK2Q9NRA0 654 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 RPL26L1Q9UNX3 145 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CORO2BQ9UQ03 480 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SNX13Q9Y5W8 968 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 A0A1W2PPM1 405 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 J3KR12 359 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 KIF1CO43896 1103 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 PRAMEF11O60813 436 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 METTL18O95568 372 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 BPGMP07738 259 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 DLDP09622 509 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ITPKAP23677 461 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CCNFP41002 786 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SCTRP47872 440 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CLDN10P78369 228 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 DSG1Q02413 1049 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ACAP2Q15057 778 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ADGRD1Q6QNK2 874 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CHST15Q7LFX5 561 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 DHFR2Q86XF0 187 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 CAMKK1Q8N5S9 505 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 KLHDC9Q8NEP7 349 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 ZSCAN5AQ9BUG6 496 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT2B28Q9BY64 529 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 PCBD2Q9H0N5 130 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 PIF1Q9H611 641 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 SGK2Q9HBY8 427 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 INVSQ9Y283 1065 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 BTRCQ9Y297 605 aa9.39□□□□□ -0.91
CLTCL1-208ENST00000615606 MEIS3P2A8K0S8 358 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 FAM220BPB1ANY3 271 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TSPAN8P19075 237 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 ATP6V1B2P21281 511 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SSR2P43308 183 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PNLIPRP1P54315 467 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 NAE1Q13564 534 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 LSM12Q3MHD2 195 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SNAP47Q5SQN1 464 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TXNRD3NBQ6F5E7 133 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TMPRSS11BQ86T26 416 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 AMZ2Q86W34 360 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC39A11Q8N1S5 342 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms