RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ASMTLO95671 621 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 PYGLP06737 847 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 AK4P27144 223 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-211ENST00000615061 DCDC1P59894 354 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 MSLNQ13421 630 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-211ENST00000615061 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 GUSBP11Q6P575 273 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 GKN2Q86XP6 184 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 NRROSQ86YC3 692 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 PDCD7Q8N8D1 485 aaKnown RBP16.6■□□□□ 0.25
CBWD3-211ENST00000615061 MS4A14Q96JA4 679 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 SRPK1Q96SB4 655 aaKnown RBP16.6■□□□□ 0.25
CBWD3-211ENST00000615061 FRMD8P1Q9BZ68 369 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-211ENST00000615061 PIH1D1Q9NWS0 290 aaKnown RBP16.6■□□□□ 0.25
CBWD3-211ENST00000615061 GULP1Q9UBP9 304 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 PRKAB1Q9Y478 270 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 KCTD3Q9Y597 815 aa16.6■□□□□ 0.25
CBWD3-211ENST00000615061 ZSCAN5DPP0CG00 497 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 STIP1P31948 543 aaKnown RBP16.59■□□□□ 0.25
CBWD3-211ENST00000615061 KCNJ1P48048 391 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 CCNG2Q16589 344 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 P3H1Q32P28 736 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 KYQ8NBH2 561 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 ZSCAN5AQ9BUG6 496 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 IL26Q9NPH9 171 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 HACD3Q9P035 362 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 NFKBIL1Q9UBC1 381 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-211ENST00000615061 TMPRSS11EQ9UL52 423 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 ZNF106Q9H2Y7 1883 aaKnown RBP16.59■□□□□ 0.25
CBWD3-211ENST00000615061 CPED1A4D0V7 1026 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 DNAJC6O75061 913 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 MTX2O75431 263 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 IVLP07476 585 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 CA5AP35218 305 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 ADCY8P40145 1251 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 SMAD1Q15797 465 aaKnown RBP16.59■□□□□ 0.25
CBWD3-211ENST00000615061 ATP13A5Q4VNC0 1218 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 TRAM1L1Q8N609 369 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 FAM46DQ8NEK8 389 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 GPBAR1Q8TDU6 330 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 SCARF2Q96GP6 870 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-211ENST00000615061 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
CBWD3-211ENST00000615061 GPR34Q9UPC5 381 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 GPSM3Q9Y4H4 160 aa16.59■□□□□ 0.25
CBWD3-211ENST00000615061 KIF26BQ2KJY2 2108 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 SLC25A14O95258 325 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-211ENST00000615061 TPH1P17752 444 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 CTBSQ01459 385 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 KHDC1Q4VXA5 237 aaKnown RBP16.58■□□□□ 0.24
CBWD3-211ENST00000615061 PYCR3Q53H96 274 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 PERM1Q5SV97 790 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 FAM151BQ6UXP7 276 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 MICALCLQ6ZW33 695 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 TMPRSS7Q7RTY8 843 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 PRELID2Q8N945 189 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 IFI44Q8TCB0 444 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 SCG3Q8WXD2 468 aaKnown RBP16.58■□□□□ 0.24
CBWD3-211ENST00000615061 GLYATL1Q969I3 302 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 PLEKHG4BQ96PX9 1271 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 CDH19Q9H159 772 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 ETNK1Q9HBU6 452 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 TRNAU1APQ9NX07 287 aaKnown RBP16.58■□□□□ 0.24
CBWD3-211ENST00000615061 ATXN10Q9UBB4 475 aa16.58■□□□□ 0.24
CBWD3-211ENST00000615061 EME2A4GXA9 379 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-211ENST00000615061 B4DGG1 531 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 GAPDHSO14556 408 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-211ENST00000615061 KIF5CO60282 957 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A9O60656 530 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 AP2A1O95782 977 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A6P19224 532 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A1P22309 533 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A4P22310 534 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A3P35503 534 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A5P35504 534 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 SPAM1P38567 509 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 INSM1Q01101 510 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-211ENST00000615061 NR0B2Q15466 257 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 SLC30A9Q6PML9 568 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 EFL1Q7Z2Z2 1120 aaKnown RBP16.57■□□□□ 0.24
CBWD3-211ENST00000615061 SDR16C5Q8N3Y7 309 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 ARL10Q8N8L6 244 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 OR4K2Q8NGD2 314 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 OR13C4Q8NGS5 318 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 COG1Q8WTW3 980 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 PPP1R2P1Q96PQ5 205 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 OR2M4Q96R27 311 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 OR2AG1Q9H205 316 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 DPEP2Q9H4A9 486 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 LRRC40Q9H9A6 602 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A7Q9HAW7 530 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A10Q9HAW8 530 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 UGT1A8Q9HAW9 530 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 ARNT2Q9HBZ2 717 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 RAD18Q9NS91 495 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.57■□□□□ 0.24
CBWD3-211ENST00000615061 ZNHIT2Q9UHR6 403 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 NEUROG3Q9Y4Z2 214 aa16.57■□□□□ 0.24
CBWD3-211ENST00000615061 ZFHX4Q86UP3 3567 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms