RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 Q6ZVL8 140 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 CYS1Q717R9 158 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 NLRP9Q7RTR0 991 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PTAR1Q7Z6K3 402 aaPredicted RBP8□□□□□ -1.13
PCDH9-205ENST00000614931 FAM124AQ86V42 546 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 CNTN4Q8IWV2 1026 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PIANPQ8IYJ0 282 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 CYP4X1Q8N118 509 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PPM1NQ8N819 430 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 DCAKDQ8WVC6 231 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 SLC44A1Q8WWI5 657 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PIGKQ92643 395 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PEX13Q92968 403 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 FUBP1Q96AE4 644 aaKnown RBP8□□□□□ -1.13
PCDH9-205ENST00000614931 RAB7BQ96AH8 199 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 DTD2Q96FN9 168 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PAFAH2Q99487 392 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 MCMBPQ9BTE3 642 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 ABCG8Q9H221 673 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 FAM96AQ9H5X1 160 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 VIPAS39Q9H9C1 493 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 IL26Q9NPH9 171 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 ITM2CQ9NQX7 267 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 TMEM74BQ9NUR3 256 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 VPS18Q9P253 973 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 PILRBQ9UKJ0 227 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 TMPRSS11EQ9UL52 423 aa8□□□□□ -1.13
PCDH9-205ENST00000614931 ZFC3H1O60293 1989 aaKnown RBP8□□□□□ -1.13
PCDH9-205ENST00000614931 ANKRD12Q6UB98 2062 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 BPTFQ12830 3046 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 TRBV5-4A0A0C4DH59 114 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 HMX2A2RU54 273 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 IGLON5A6NGN9 336 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PATE3B3GLJ2 98 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 TCEA3O75764 348 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 RECQL5O94762 991 aaPredicted RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SOD1P00441 154 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 IGLV3-19P01714 112 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 UGT1A6P19224 532 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 UGT1A1P22309 533 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 UGT1A4P22310 534 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ACSL1P33121 698 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 HOXD12P35452 270 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 UGT1A3P35503 534 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 UGT1A5P35504 534 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SPAM1P38567 509 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 TPMTP51580 245 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SUOXP51687 545 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PRAMEP78395 509 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 IRX4P78413 519 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PDE1BQ01064 536 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ZBTB16Q05516 673 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 BMPR2Q13873 1038 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ARHGEF7Q14155 803 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 STAT4Q14765 748 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ACOX1Q15067 660 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CHRNA6Q15825 494 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SKIDA1Q1XH10 827 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 KLHL38Q2WGJ6 581 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 TTC31Q49AM3 519 aaPredicted RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PPM1JQ5JR12 505 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CEP85LQ5SZL2 805 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 HENMT1Q5T8I9 393 aaKnown RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 LYSMD4Q5XG99 296 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SEL1L3Q68CR1 1132 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ZNF470Q6ECI4 717 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 NEPROQ6NW34 567 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ERAP2Q6P179 960 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ZNF449Q6P9G9 518 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SLC23A3Q6PIS1 610 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 AFTPHQ6ULP2 937 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PACS1Q6VY07 963 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 USP30Q70CQ3 517 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ARMCX6Q7L4S7 300 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SYT12Q8IV01 421 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CTAGE3PQ8IX95 158 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 NDUFAF2Q8N183 169 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 C2CD4AQ8NCU7 369 aaPredicted RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ACVR1CQ8NER5 493 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 OR6P1Q8NGX9 317 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 MZB1Q8WU39 189 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 KLK6Q92876 244 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SCAMP4Q969E2 229 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 ARL8AQ96BM9 186 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 SRPK1Q96SB4 655 aaKnown RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CYTH2Q99418 400 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 OMDQ99983 421 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 EDEM2Q9BV94 578 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 TMEM109Q9BVC6 243 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 FBXO6Q9NRD1 293 aaPredicted RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CATSPERZQ9NTU4 200 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PKD2L2Q9NZM6 624 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 NFKBIL1Q9UBC1 381 aaPredicted RBP7.99□□□□□ -1.13
PCDH9-205ENST00000614931 FBXO5Q9UKT4 447 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CYP8B1Q9UNU6 501 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 PKP3Q9Y446 797 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CACNA1AO00555 2505 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 CEP250Q9BV73 2442 aa7.99□□□□□ -1.13
PCDH9-205ENST00000614931 GLYATL1P3A0A0U1RQE8 302 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms