RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 PIAS1O75925 651 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 NUDT7P0C024 238 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 SUPT20HL1Q3ZLR7 823 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 DPY19L3Q6ZPD9 716 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 CMTR2Q8IYT2 770 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 ZFP28Q8NHY6 868 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 PANX1Q96RD7 426 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 SCN9AQ15858 1988 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ZNF3P17036 446 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 TPH1P17752 444 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 PDHA2P29803 388 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 SMARCB1Q12824 385 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ADNP2Q6IQ32 1131 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ING5Q8WYH8 240 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 POLE4Q9NR33 117 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 PCDHGA11Q9Y5H2 935 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 SMIM22K7EJ46 135 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 OTCP00480 354 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 CYP3A4P08684 503 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 RPS2P15880 293 aaKnown RBP13.71□□□□□ -0.22
CHD1-212ENST00000614616 FOXN2P32314 431 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 NPTX1Q15818 432 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 CUZD1Q86UP6 607 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 CIDECQ96AQ7 238 aaPredicted RBP13.71□□□□□ -0.22
CHD1-212ENST00000614616 CPNE5Q9HCH3 593 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 PVALBP20472 110 aaPredicted RBP13.71□□□□□ -0.22
CHD1-212ENST00000614616 STT3AP46977 705 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 VEPH1Q14D04 833 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 ZBTB6Q15916 424 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 USP30Q70CQ3 517 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 NKAPQ8N5F7 415 aaKnown RBP13.71□□□□□ -0.22
CHD1-212ENST00000614616 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 MED30Q96HR3 178 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 MAELQ96JY0 434 aaKnown RBP13.71□□□□□ -0.22
CHD1-212ENST00000614616 FNDC11Q9BVV2 318 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 KCNH7Q9NS40 1196 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 STXBP5LQ9Y2K9 1186 aa13.71□□□□□ -0.22
CHD1-212ENST00000614616 LMO7Q8WWI1 1683 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 NUAK1O60285 661 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 RGS1Q08116 209 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 IL23RQ5VWK5 629 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 OAFQ86UD1 273 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 SELENOMQ8WWX9 145 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 TLR8Q9NR97 1041 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 KNDC1Q76NI1 1749 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 PTTG1O95997 202 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 EPB42P16452 691 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 CDH15P55291 814 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 PPP2R2BQ00005 443 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 KLHL22Q53GT1 634 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 EI24O14681 340 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 GJD3Q8N144 294 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 ZNF614Q8N883 585 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 ROBO3Q96MS0 1386 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 H3BNH8 94 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 ALDH1A1P00352 501 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 FMO3P31513 532 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 OR52K1Q8NGK4 314 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 CEP76Q8TAP6 659 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 ZNF486Q96H40 463 aaPredicted RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 ISCA1Q9BUE6 129 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 AQP12BA6NM10 295 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 PLIN3O60664 434 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 ZNF7P17097 686 aaPredicted RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 VARSP26640 1264 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 ACOT1Q86TX2 421 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 AQP12AQ8IXF9 295 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 COQ8AQ8NI60 647 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 SNX27Q96L92 541 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 PCDHB16Q9NRJ7 776 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 C1orf196B1AJZ1 125 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 SERPINB7O75635 380 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 RPP38P78345 283 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 ANXA8L1Q5VT79 327 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 LRRC69Q6ZNQ3 347 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 AP1S3Q96PC3 154 aa13.7□□□□□ -0.22
CHD1-212ENST00000614616 PPIEQ9UNP9 301 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
CHD1-212ENST00000614616 ZNF781Q8N8C0 355 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 BBS4Q96RK4 519 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 ZNF670Q9BS34 389 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 KLQ9UEF7 1012 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 CLEC4AQ9UMR7 237 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 FAM47E-STBD1D6RA91 191 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 F8VP50 259 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 MATN1P21941 496 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms