RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 IFT20Q8IY31 132 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PLD6Q8N2A8 252 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RTL3Q8N8U3 475 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 LPCAT1Q8NF37 534 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 OR2A12Q8NGT7 310 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 OR2T3Q8NH03 318 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PCDH19Q8TAB3 1148 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 NSMCE1Q8WV22 266 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 C1orf54Q8WWF1 131 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RFFLQ8WZ73 363 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 ARHGEF2Q92974 986 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 HSPBAP1Q96EW2 488 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 TRIM11Q96F44 468 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MRGPRX3Q96LB0 322 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MAGEB10Q96LZ2 347 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CEP295NLQ96MC4 621 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 SEMA3CQ99985 751 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 DUSP15Q9H1R2 295 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 EPB41L5Q9HCM4 733 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RNF14Q9UBS8 474 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 OR1A2Q9Y585 309 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 HELZP42694 1942 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TCRBV7S2A1N4TA0A589 114 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 LNP1A1A4G5 178 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 GRID2IPA4D2P6 1211 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ANKRD34BA5PLL1 514 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TNFRSF10CO14798 259 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 HEXIM1O94992 359 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TOP3BO95985 862 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SNRPB2P08579 225 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 F7P08709 466 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 BPIP17213 487 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 LSP1P33241 339 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SOX18P35713 384 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 IGFALSP35858 605 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 PAFAH1B1P43034 410 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SERPINH1P50454 418 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 DPYSL3Q14195 570 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 PIGHQ14442 188 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 RSPO4Q2I0M5 234 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 PSAPL1Q6NUJ1 521 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TRIM46Q7Z4K8 759 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ZC3H7AQ8IWR0 971 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 DEFB124Q8NES8 71 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 DIO2Q92813 273 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ARRDC3Q96B67 414 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TEKT5Q96M29 485 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 CCDC114Q96M63 670 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 HAPLN3Q96S86 360 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 RBM15Q96T37 977 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 KRT12Q99456 494 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 KCNJ15Q99712 375 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 EPN3Q9H201 632 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 NFS1Q9Y697 457 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 CACNA1AO00555 2505 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 EDDM13A0A1B0GTR0 161 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TCRBV5S1A1TA0A578 114 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ARHGAP42A6NI28 874 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 RAD51CO43502 376 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ADAM11O75078 769 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 MTX2O75431 263 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 PDHA1P08559 390 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 P2RY2P41231 377 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 CD86P42081 329 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SLC25A11Q02978 314 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SLC10A2Q12908 348 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SGCGQ13326 291 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ELAVL3Q14576 367 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ACOX1Q15067 660 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 UAP1Q16222 522 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ANKRD20A8PQ5CZ79 823 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 SPOCD1Q6ZMY3 1216 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 PARS2Q7L3T8 475 aaKnown RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 POLNQ7Z5Q5 900 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 BVESQ8NE79 360 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 IPMKQ8NFU5 416 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 GDAP1Q8TB36 358 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 HERPUD2Q9BSE4 406 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 EBF2Q9HAK2 575 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 NOD2Q9HC29 1040 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TRPV5Q9NQA5 729 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 DNAJC28Q9NX36 388 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 KLHL8Q9P2G9 620 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 IL36AQ9UHA7 158 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ITGB1BP2Q9UKP3 347 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 TTC7AQ9ULT0 858 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-209ENST00000613524 COL6A6A6NMZ7 2263 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 POM121BA6NF01 834 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 C1QTNF3-AMACRE9PGA6 284 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 CEP104O60308 925 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 CYP1A2P05177 515 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 MYBL1P10243 752 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ETS1P14921 441 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 IFNGR1P15260 489 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 ENGP17813 658 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 CHRNA4P43681 627 aa4.97□□□□□ -1.61
SYCP1-209ENST00000613524 KCNJ1P48048 391 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms