RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZNF3P17036 446 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 AMPD1P23109 780 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 DSG3P32926 999 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 MAGEA3P43357 314 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 EEFSECP57772 596 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 GCNT7Q6ZNI0 430 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 ZBED3Q96IU2 234 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 ELOVL7A1L3X0 281 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 HOXC6P09630 235 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 HADHBP55084 474 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 SUPT20HL1Q3ZLR7 823 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 ZNF416Q9BWM5 594 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 METTL8Q9H825 291 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 FAM105AQ9NUU6 356 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SAGE1Q9NXZ1 904 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 ZC3H4Q9UPT8 1303 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 E2F8A0AVK6 867 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 RRN3P2A6NIE6 340 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SIGLEC16A6NMB1 481 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 C12orf71A8MTZ7 269 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 L7N2F9 121 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 KMOO15229 486 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 DRICH1Q6PGQ1 229 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 CPXM1Q96SM3 734 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 BTG4Q9NY30 223 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 CLEC4AQ9UMR7 237 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 WASF2Q9Y6W5 498 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 KNTC1P50748 2209 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 SULT1C2O00338 296 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 CPSF4O95639 269 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 HPGDP15428 266 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 ITGA3P26006 1051 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 AFF1P51825 1210 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 DAG1Q14118 895 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 HPS6Q86YV9 775 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 DCP1BQ8IZD4 617 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 SPARTQ8N0X7 666 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 ZNF486Q96H40 463 aaPredicted RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 PBDC1Q9BVG4 233 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 COG5Q9UP83 839 aa8.74□□□□□ -1.01
TTC28-208ENST00000612946 MRPS7Q9Y2R9 242 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 ARHGEF28Q8N1W1 1705 aaKnown RBP8.74□□□□□ -1.01
TTC28-208ENST00000612946 RIIAD1A6NNX1 92 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PKLRP30613 574 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 HUNKP57058 714 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PPP3R1P63098 170 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 DYNLL1P63167 89 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 MPP7Q5T2T1 576 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 NEPROQ6NW34 567 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 TMEM139Q8IV31 216 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 KIAA0895Q8NCT3 520 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 LRRC3Q9BY71 257 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 TAS2R3Q9NYW6 316 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 TRPC4Q9UBN4 977 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 CRYL1Q9Y2S2 319 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SCN9AQ15858 1988 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SGPL1O95470 568 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ALG11Q2TAA5 492 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SLC34A3Q8N130 599 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 FAM109AQ8N4B1 249 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 BANPQ8N9N5 519 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 HSPA12BQ96MM6 686 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 TMEM246Q9BRR3 403 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 FAIM2Q9BWQ8 316 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 HOXC10Q9NYD6 342 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ADGRE2Q9UHX3 823 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PLA2G4CQ9UP65 541 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SLC9A3R1O14745 358 aaPredicted RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 PROM1O43490 865 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ERN1O75460 977 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 MAPK8P45983 427 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ARF5P84085 180 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 VSTM1Q6UX27 236 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ZNF367Q7RTV3 350 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 PARP8Q8N3A8 854 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 SPIRE2Q8WWL2 714 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 WDCPQ9H6R7 721 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 A0A087X0B3 334 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 OR10H3O60404 316 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 AKAP3O75969 853 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 FECHP22830 423 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 POLR2JP52435 117 aaKnown RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 ZNF772Q68DY9 489 aaPredicted RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 SLC9A9Q8IVB4 645 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 FAM71AQ8IYT1 594 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ACOX2Q99424 681 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 POFUT2Q9Y2G5 429 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 A6NHS1 94 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 MZF1P28698 734 aaPredicted RBP8.73□□□□□ -1.01
TTC28-208ENST00000612946 NAGLUP54802 743 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 RPA4Q13156 261 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.73□□□□□ -1.01
TTC28-208ENST00000612946 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 DEPDC5O75140 1603 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 A0A0J9YYE9 177 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 MTA2O94776 668 aa8.73□□□□□ -1.01
TTC28-208ENST00000612946 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms