RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 HMX1Q9NP08 348 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 MAP10Q9P2G4 905 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 POLG2Q9UHN1 485 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 C15orf38-AP3S2A0A0A6YYH1 394 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 PRSS51A0A1B0GVH4 220 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZNF839A8K0R7 811 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 PEX1O43933 1283 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 C1RP00736 705 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 CLCQ05315 142 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 KIAA1841Q6NSI8 718 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 TAS2R42Q7RTR8 314 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 ARPINQ7Z6K5 226 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 PHYKPLQ8IUZ5 450 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 CRIPAKQ8N1N5 446 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 GPR150Q8NGU9 434 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
PCDHGA3-202ENST00000612467 GBP5Q96PP8 586 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 PCDHB9Q9Y5E1 797 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 TRIM24O15164 1050 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 ADSLP30566 484 aaPredicted RBP14□□□□□ -0.17
PCDHGA3-202ENST00000612467 TRIM25Q14258 630 aaKnown RBP14□□□□□ -0.17
PCDHGA3-202ENST00000612467 IYDQ6PHW0 289 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 UGT2A3Q6UWM9 527 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 GALNT7Q86SF2 657 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 AFAP1L2Q8N4X5 818 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 TMEM102Q8N9M5 508 aaPredicted RBP14□□□□□ -0.17
PCDHGA3-202ENST00000612467 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
PCDHGA3-202ENST00000612467 DOCK6Q96HP0 2047 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 TSC22D3Q99576 134 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 UNC93B1Q9H1C4 597 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 CCDC68Q9H2F9 335 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 EIF2B4Q9UI10 523 aaKnown RBP14□□□□□ -0.17
PCDHGA3-202ENST00000612467 VPS28Q9UK41 221 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 USP22Q9UPT9 525 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 AP4B1Q9Y6B7 739 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 UNC80Q8N2C7 3258 aa14□□□□□ -0.17
PCDHGA3-202ENST00000612467 ANKRD66B4E2M5 251 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TBL1XO60907 577 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ALDH1A1P00352 501 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 EPOP01588 193 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ARL1P40616 181 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ALDH7A1P49419 539 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SUOXP51687 545 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 STX5Q13190 355 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 RFTN1Q14699 578 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SYVN1Q86TM6 617 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SATL1Q86VE3 508 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SEPT8Q92599 483 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 LINGO1Q96FE5 620 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 FAR2Q96K12 515 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TTLL2Q9BWV7 592 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ABCG8Q9H221 673 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 PIF1Q9H611 641 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 C6orf203Q9P0P8 240 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLAMF8Q9P0V8 285 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 NRG2O14511 850 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TPST1O60507 370 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TIPRLO75663 272 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TSPAN12O95859 305 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ATP6V1B2P21281 511 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 CASP2P42575 452 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TAF12Q16514 161 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 MTX3Q5HYI7 312 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ALG1LQ6GMV1 187 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 OR52B6Q8NGF0 335 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 OR2T11Q8NH01 316 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ASB9Q96DX5 294 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 CAPNS2Q96L46 248 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 PLEKHG4BQ96PX9 1271 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SPAG4Q9NPE6 437 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 CROTQ9UKG9 612 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 CLEC4EQ9ULY5 219 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SNX13Q9Y5W8 968 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 FAM149AA5PLN7 773 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 H7C4K7 107 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 NME4O00746 187 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SMAD6O43541 496 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 OGNP20774 298 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 NFKB2Q00653 900 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TAF1AQ15573 450 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 C5orf22Q49AR2 442 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SPOUT1Q5T280 376 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 KANK2Q63ZY3 851 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 TXNDC8Q6A555 127 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 IFNEQ86WN2 208 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 CAMK1DQ8IU85 385 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 BBS5Q8N3I7 341 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 KIAA1191Q96A73 305 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLC29A1Q99808 456 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 BOCQ9BWV1 1114 aa13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 ELAC1Q9H777 363 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-202ENST00000612467 MYO7AQ13402 2215 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 C7orf72A4D263 438 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 C2orf81A6NN90 581 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 H0Y626 953 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 KERAO60938 352 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CLDN11O75508 207 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CRCPO75575 148 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms