RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TSPAN17Q96FV3 270 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 C9orf16Q9BUW7 83 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 FAM105AQ9NUU6 356 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 SMPD3Q9NY59 655 aaPredicted RBP20.31■□□□□ 0.84
SSBP3-216ENST00000610401 BTBD19C9JJ37 291 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CD3EAPO15446 510 aaKnown RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CD1DP15813 335 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 PIK3R6Q5UE93 754 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 NANOGP8Q6NSW7 305 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 BORAQ6PGQ7 559 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 KIAA2013Q8IYS2 634 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 SLC15A4Q8N697 577 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 SLC30A3Q99726 388 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 SLC38A7Q9NVC3 462 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 POLR3BQ9NW08 1133 aaPredicted RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CNOT11Q9UKZ1 510 aaKnown RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 ST14Q9Y5Y6 855 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 XIRP2A4UGR9 3374 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 COL1A2P08123 1366 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CCL15-CCL14A0A0B4J2E2 113 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 OR1I1O60431 355 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 C1RP00736 705 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 LDLRP01130 860 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 LEPRP48357 1165 aaKnown RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 BMXP51813 675 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 KPNA1P52294 538 aaPredicted RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CCL15Q16663 113 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 SLC39A12Q504Y0 691 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 NOL6Q9H6R4 1146 aaKnown RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 ANAPC2Q9UJX6 822 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 NEU3Q9UQ49 428 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 RBMX2Q9Y388 322 aaKnown RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 PPP2R3BQ9Y5P8 575 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 AGRPO00253 132 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 PSMD3O43242 534 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 SHMT2P34897 504 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CCT8P50990 548 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 NR1D2Q14995 579 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CYBRD1Q53TN4 286 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 BBS5Q8N3I7 341 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 TTC9BQ8N6N2 239 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 CALML6Q8TD86 181 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 BHMTQ93088 406 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 BIRC7Q96CA5 298 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 PLEKHA8Q96JA3 519 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 RPRD1AQ96P16 312 aaPredicted RBP20.3■□□□□ 0.84
SSBP3-216ENST00000610401 GID8Q9NWU2 228 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 PKD2L2Q9NZM6 624 aa20.3■□□□□ 0.84
SSBP3-216ENST00000610401 SH3PXD2BA1X283 911 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 GNGT2O14610 69 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 ACOX3O15254 700 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 SYNCRIPO60506 623 aaKnown RBP20.29■□□□□ 0.84
SSBP3-216ENST00000610401 GUCA1CO95843 209 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 SLC36A3Q495N2 470 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 PAF1Q8N7H5 531 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 TRPV3Q8NET8 790 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 OR52B6Q8NGF0 335 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 CLHC1Q8NHS4 586 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 HIPK3Q9H422 1215 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 PRDM8Q9NQV8 689 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 MUSKO15146 869 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 OR4F21O95013 312 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 MTHFD2P13995 350 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 PCSK1P29120 753 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 PSEN2P49810 448 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 CYP2A13Q16696 494 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 RAB41Q5JT25 222 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 SPATA2LQ8IUW3 424 aaPredicted RBP20.29■□□□□ 0.84
SSBP3-216ENST00000610401 LZTR1Q8N653 840 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 DDHD1Q8NEL9 900 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 HM13Q8TCT9 377 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 SDCCAG3Q96C92 435 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 CCDC68Q9H2F9 335 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 ABHD16BQ9H3Z7 469 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 EIF2B4Q9UI10 523 aaKnown RBP20.29■□□□□ 0.84
SSBP3-216ENST00000610401 PRG3Q9Y2Y8 225 aaPredicted RBP20.29■□□□□ 0.84
SSBP3-216ENST00000610401 SBF1O95248 1867 aa20.29■□□□□ 0.84
SSBP3-216ENST00000610401 SMIM35A0A1B0GVV1 85 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 FFAR3O14843 346 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 GPR42O15529 346 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 BMP10O95393 424 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 MEP1AQ16819 746 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 INTS6LQ5JSJ4 861 aaKnown RBP20.28■□□□□ 0.84
SSBP3-216ENST00000610401 OVOS1Q6IE37 1185 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 PGBD5Q8N414 524 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 SEPT8Q92599 483 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 MYEOVQ96EZ4 313 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 CCDC138Q96M89 665 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 GPR21Q99679 349 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 TRIM15Q9C019 465 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 NANOGQ9H9S0 305 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 ASPDHA6ND91 283 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 CNPP09543 421 aaKnown RBP20.28■□□□□ 0.84
SSBP3-216ENST00000610401 FSHRP23945 695 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 HMOX2P30519 316 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 CREB5Q02930 508 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 PPIL2Q13356 520 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 MAPK11Q15759 364 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 GLYATQ6IB77 296 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 KDELC1Q6UW63 502 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms